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Name : nusG (SPO3516) Accession : YP_168711.1 Strain : Ruegeria pomeroyi DSS-3 Genome accession: NC_003911 Putative virulence/resistance : Unknown Product : transcription termination/antitermination factor NusG Function : - COG functional category : K : Transcription COG ID : COG0250 EC number : - Position : 3726043 - 3726576 bp Length : 534 bp Strand : - Note : identified by match to protein family HMM PF00467; match to protein family HMM PF02357; match to protein family HMM TIGR00922 DNA sequence : ATGGCGAAACGGTGGTATTCGGTCAGCGTGCTTTCGAACTTCGAGAAGAAGGTCGCCGAACAGATCCGCGCCTCGGTCGC CGAGAACGGGCTTGAAGATCAGATCGACGAGGTGCTGGTGCCGACCGAAGAGGTCATCGAGGTGCGCCGCGGCAAGAAGG TCTCGACCGAGCGCCGGTTCATGCCCGGCTATGTGCTGGTGCATATGGAAATGTCCGACCAGGGCTATCACCTGATCAAC ACGATCAACCGGGTCACCGGTTTCCTGGGCCCGCAGGGCCGCCCGATGCCGATGCGCGATGCCGAGGTCAACCAGATCCT CAACCGCGTGCAGGAAGGCGAAGAGGCGCCGCGCACCCTGATCTCGTTTGAGATCGGCGAGCGCGTCAAGGTCAACGACG GCCCGTTCGAAGGCTTCGACGGCATGGTCGAGGGCGTTGACGACGATAGCCAGAAACTGCGCGTGTCGGTGTCGATCTTC GGTCGCGAAACCCCGGTCGAGCTGGACTTTACCCAGGTGGCGAAACAAGGCTGA Protein sequence : MAKRWYSVSVLSNFEKKVAEQIRASVAENGLEDQIDEVLVPTEEVIEVRRGKKVSTERRFMPGYVLVHMEMSDQGYHLIN TINRVTGFLGPQGRPMPMRDAEVNQILNRVQEGEEAPRTLISFEIGERVKVNDGPFEGFDGMVEGVDDDSQKLRVSVSIF GRETPVELDFTQVAKQG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00341 | YP_008207806.1 | Transcription antiterminator | Not tested | AbaR25 | Protein | 1e-36 | 44 |
| BJAB0868_00345 | YP_008211671.1 | Transcription antiterminator | Not tested | AbaR26 | Protein | 1e-36 | 44 |
