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Name : SPO3426 (SPO3426) Accession : YP_168622.1 Strain : Ruegeria pomeroyi DSS-3 Genome accession: NC_003911 Putative virulence/resistance : Virulence Product : DNA-binding response regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 3629493 - 3630179 bp Length : 687 bp Strand : - Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00486 DNA sequence : ATGGCGCAGCTGAAGAAGATCCTGCTGGTGGATGACGACGACGACCTGCGCGAAGCGCTGAGCGAACAGCTGGTCATGAC CGAGGATTTCGATGTCTTCGAGGCCGAGACCGGCCATGCGGCATCGGAACGGACCAAAGAGGCGATCTATGATCTGGTGA TCCTGGATGTGGGCCTGCCCGATACCGATGGGCGCGAACTCTGCCGGCTGATGCGCAAGCAGGGCGTCAAGAGCCCGATC ATCATGCTGACCGGCCACGACAGCGATGCCGACACCATCCTGGGCCTGGATGCCGGTGCCAACGACTATGTCAGCAAACC GTTCAAGTTTCCGGTGTTGCTGGCGCGCATCCGCTCGCAGCTGCGCCAGCACGAACAGTCCGAGGACGCGGTGTTCCAGC TGGGGCCCTATACGTTCAAGCCAGCGATGAAGATGCTGATCACCGAGGATGATCGCAAGATCCGCCTGACCGAGAAAGAG ACCAACATCCTCAAGTATCTCTATCGCTCGACCGACGGCGTGGTGCCCCGCGACGTGCTCCTGCACGAGGTCTGGGGATA CAATGCCGGGGTCACCACCCACACCCTGGAAACCCACATCTATCGCCTGCGCCAGAAGATCGAGCCCGATCCGTCAAACG CGCGCCTGCTGGTCACCGAATCCGGCGGATACAGGCTTGTGGCGTAA Protein sequence : MAQLKKILLVDDDDDLREALSEQLVMTEDFDVFEAETGHAASERTKEAIYDLVILDVGLPDTDGRELCRLMRKQGVKSPI IMLTGHDSDADTILGLDAGANDYVSKPFKFPVLLARIRSQLRQHEQSEDAVFQLGPYTFKPAMKMLITEDDRKIRLTEKE TNILKYLYRSTDGVVPRDVLLHEVWGYNAGVTTHTLETHIYRLRQKIEPDPSNARLLVTESGGYRLVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| copR | NP_460069.2 | transcriptional regulatory protein YedW | Not tested | SPI-5 | Protein | 1e-23 | 43 |
| copR | AAC33719.1 | regulatory protein CopR | Not tested | SPI-5 | Protein | 2e-23 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SPO3426 | YP_168622.1 | DNA-binding response regulator | VFG0596 | Protein | 5e-24 | 43 |
