|
Name : deoA (SPO2929) Accession : YP_168137.1 Strain : Ruegeria pomeroyi DSS-3 Genome accession: NC_003911 Putative virulence/resistance : Unknown Product : thymidine phosphorylase Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0213 EC number : 2.4.2.4 Position : 3127799 - 3129109 bp Length : 1311 bp Strand : - Note : Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate DNA sequence : ATGGACGCCCGCGCCATCATTGCCCGGCTCAGGCGCCACGAGGTGCCCAGTGCGGCTGAACTGACCTGGTTCGCCCAAGG CCTTGCCGATGGTAGTGTCAGCGATGCTCAGGCGGGCGCCTTTGCCATGGGTGTTTGCATGGGTCGGCTTGGCTCTGAGG GGCGCGCGGCGCTGACATTGGCCATGCGCGATACCGGCGATGTGCTGCACTGGGATTTCGACGGGCCGGTGATCGACAAG CATTCCACCGGCGGGGTGGGAGATTGCGTCAGTCTGGTGCTGGCGCCCGCGCTGGCCGAATGCGGTACCTATGTGCCGAT GATCTCGGGCCGGGGGCTGGGCCATACCGGCGGTACGCTCGACAAGATGGAGGCGATCCCCGGCGTCACCACCCAGCTTG GGCCTGACCGGCTGGCGCAGGTGGTACGCGATACCGGCGCTGCCATCGTTGGCGCCACCGCGCGCATCGCGCCCGCCGAC AAGCGGCTCTATGCCATCCGCGATGTGACCGCCACGGTCGAAAGCCTCGATCTGATCACCGCCTCGATCCTGTCCAAGAA ACTGGCCGCCAGCCCCGATGCGTTGGTTCTGGACGTTAAACTGGGCAGCGGCGCCTTCATGAAATCGCCGGACGAGGCGC GCGCGCTGGCCCTTGCCCTGACCGAGACCGCCAATGCCGCTGGCTGCCGGACCTCGGCCCTGATCACCGATATGAGCCAG CCGCTGGCGCCCAGCCTCGGCAACGCGCTCGAGGTGGGCGAGGTGATGCGGGTGCTGACCTCTGGTCACGCTGATGACCC GCTGGCACAACTCTCGGCGGAGCTGGGCGGCGTGCTGCTCTCTGATGCGGGGCTGGCAACGGATGCGGTCAGCGGGGCCG CGCGCATTGCTGCCATCATCTCAGACGGTCGCGCGGCCGAACGCTTTGGTCGCATGATCGCGGCTGTCGGCGGGCCGGTG CAATTTGTCGAGAACTGGCAGCGGTTCCTGCCCGAGGCAACCGTGATCCGCGAGGTTCCCGCCCGCGCGTCAGGCTATGT CACCGCCATCGACGGCGAGGTGTTGGGCCTTGCCGTGGTGGCGCTGGGCGGCGGGCGGCAGGTCGAGACCGATGTTGTTG ACCCGGCGGTTGGCCTGTCACGGGTGATCCGGCTGGGCACAGCGGTTAACCCAGGCACCCCGCTCGCCACCATCCACGCC GCAAGGCAAGAGGCGGCAGAGGCAGCCGAGGCCACCCTGCGCGCGGCGATCACCATCGGGCCAGAGCCGGTGGCCGCGCC ACCGCTTATCCATGAAAGGATCACGCCATGA Protein sequence : MDARAIIARLRRHEVPSAAELTWFAQGLADGSVSDAQAGAFAMGVCMGRLGSEGRAALTLAMRDTGDVLHWDFDGPVIDK HSTGGVGDCVSLVLAPALAECGTYVPMISGRGLGHTGGTLDKMEAIPGVTTQLGPDRLAQVVRDTGAAIVGATARIAPAD KRLYAIRDVTATVESLDLITASILSKKLAASPDALVLDVKLGSGAFMKSPDEARALALALTETANAAGCRTSALITDMSQ PLAPSLGNALEVGEVMRVLTSGHADDPLAQLSAELGGVLLSDAGLATDAVSGAARIAAIISDGRAAERFGRMIAAVGGPV QFVENWQRFLPEATVIREVPARASGYVTAIDGEVLGLAVVALGGGRQVETDVVDPAVGLSRVIRLGTAVNPGTPLATIHA ARQEAAEAAEATLRAAITIGPEPVAAPPLIHERITP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoA | YP_005163381.1 | Thymidine phosphorylase | Not tested | Not named | Protein | 1e-47 | 41 |
