|
Name : SPO2842 (SPO2842) Accession : YP_168050.1 Strain : Ruegeria pomeroyi DSS-3 Genome accession: NC_003911 Putative virulence/resistance : Unknown Product : short chain dehydrogenase/reductase oxidoreductase Function : - COG functional category : I : Lipid transport and metabolism COG ID : COG1028 EC number : - Position : 3041580 - 3042320 bp Length : 741 bp Strand : + Note : identified by match to protein family HMM PF00106 DNA sequence : ATGCGCCCGACCCTCCTCATCACCGGGGCCAGCGCCGGGATCGGCGCCGCAACCGCCCGCCTTGCCGCGACGCGCGGCTA TGACCTCGCGCTCAACTACCGGCAGGACCGGGCCGGGGCCGAGGCGGTGGCCGAGGCCGCCCGCGACGCGGGCGCCCAGG TGATCCTGTGTCCCGGCGACGTGGCCGATCCCGAAGACATCCGGCGCATTTATGCCCGGGTGGATGAGGGCTTTGGCCGG CTCGACGGGCTGGTCAACAATGCCGGCATCGTCGATCACGCCGCCCGGGTCACCGATCTGACCCATGCGCGGCTGAGACG CATGTTCGATGTCAACGTGATCGGCGCCATTCTGGTCGCCAAAGAGGCGGTGCTGCGGATGCAGGCCCATGGCCAGGGCG GCGCCATCGTCAATCTCTCTTCCGCCGCCGCCCGGCTGGGCTCGGCCAATCAATATGTCGACTATGCCGCCAGCAAGGCC GCCATCGACATCTTTACCAAGGGCCTCGCCGACGAGGTCGCCGCAGAGGGTATTCGCGTGAACGCCCTGCGCCCCGGCCT GATCGAGACCGCCATCCACGCCAAGGGCGGCGAGCCGGACCGGGCACAACGACTGGCTCCGGGCGTGCCGATGCGGCGCA CCGGCACCGCGACCGAGGCGGCCGAGGCGGTGCTTTTCCTGCTGTCGGATGCGGCGTCTTATGTCACTGGCACCACGCTG GATGTCAGCGGCGGAAGGTGA Protein sequence : MRPTLLITGASAGIGAATARLAATRGYDLALNYRQDRAGAEAVAEAARDAGAQVILCPGDVADPEDIRRIYARVDEGFGR LDGLVNNAGIVDHAARVTDLTHARLRRMFDVNVIGAILVAKEAVLRMQAHGQGGAIVNLSSAAARLGSANQYVDYAASKA AIDIFTKGLADEVAAEGIRVNALRPGLIETAIHAKGGEPDRAQRLAPGVPMRRTGTATEAAEAVLFLLSDAASYVTGTTL DVSGGR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf29 | AAO17195.1 | Orf29 | Not tested | tcd island | Protein | 4e-39 | 53 |
| VSAL_I1482 | YP_002262921.1 | glucose 1-dehydrogenase | Not tested | Not named | Protein | 2e-36 | 47 |
