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Name : SPO2813 (SPO2813) Accession : YP_168021.1 Strain : Ruegeria pomeroyi DSS-3 Genome accession: NC_003911 Putative virulence/resistance : Unknown Product : peptide/nickel/opine uptake ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 3003109 - 3004974 bp Length : 1866 bp Strand : - Note : identified by match to protein family HMM PF00005 DNA sequence : GTGCTGGATCAGCCTATTGCACAGATCAAGAAGCTCAGGGTCGAGTTCCAGACCAAGGATGGCCCCGTTGTTGGGGTCGA GGATGTCTCGTTCGAGATCAATCCGGGCGAAACGGTCTGCATCGTCGGCGAATCAGGCTCGGGCAAGTCGGTTTCCTCGT TGTCGCTGATGCGGCTGGTGGAATTCGGCGGCGGCGATATCGCCGGCGGACAGCTGCTGTTTGACCGGCGCGATGGCGGC GAGCTGGATCTGGCCACCGCCGACCAGGATTACATGCGCAACATTCGCGGCAACGAGATCGGGATGATCTTTCAAGAGCC GATGACGGCGCTGAACCCGGTCTTTACCGTCGGGCGTCAGCTGACCGAAGGGCTGCGCGTGCACAAGGGCATGAACCAGT CCCAGGCCGAGGAACGCGCGCTGGAACTGCTGCGTCAGGTGCGCATCCCCGAGCCCGAGCGGCGACTGAAGCAGTATCCG CACGAACTCAGCGGCGGCATGCGCCAGCGGGTGGTGATCGCGATGGCGATGGCCTGCGAGCCGCGCCTGCTGATCGCCGA TGAACCCACGACCGCGCTCGACGTGACCATCCAGGCCGAGATCCTGGCGCTGATGGACCGGTTGAAACGCGAGACCGGCA CCGCGGTGATGTTCATCACCCATGACATGGCGGTGGTGGCGCAGATGGCCGACCGTGTCGTGGTCATGTTCCGCGGCAAC AAGGTCGAGGAGGGCACGGTCGAGGAGATCTTCGAGAACCCGCAGCACGAATATACCAAGGCGCTGCTGGCCGCCGTGCC CAAGCTGGGCGAGATGCATGGCAAGGCGGCGCCCGAGCCGATGAAGCTGATGGGGGTCGCCGATCAGCGGATCGAGCCGA TCATAGGCACCGAAAGCCCGCTGCTGACGGTCAAGGGGCTGACCACGCGCTTTCCGGTCAAGGGCGGCTTCTTCCGCCGC ACCGTGGCCAATGTGCATGCGGTCGAGGATGTCTCGTTCACCCTCAACAAGGGGCAGACTCTCAGCCTGGTCGGCGAATC GGGCTGCGGCAAGTCCTCGGCCGGCCGCTCGATCCTGCGGCTGGTCGAACCGATGGCGGGCGAGATCGATCTGGACGGGG TCGATATCATGCAGCTGGATCAGTCGGGGCTGCGCAAGGCGCGGCTCGACATGCAGATGATCTTTCAGGACCCGTTCGCC TCGCTCAATCCGCAGATGCAGCTGCTGGAGCAGGTGGCTGAGCCGATGCGCAACTATGGCGTCGCCAGCGGGTCGGAGCT GGTGGACCGGGTCGCCTCGCTGTTTGACCGCGTGCAATTGCCGCGCAGCTTCATGCGCCGCTATCCGCATGAAATGTCGG GCGGCCAGCGGCAGCGGATCGCGATTGCGCGCGCACTGGCGCTGAACCCCAAGCTGATCGTCGCGGATGAGGCGGTCTCG GCGCTGGATGTGTCGGTGCAGGCGCAGGTGCTGAATCTGATGATGGAATTGCAGGCCGATCTGGGGCTCAGCTATCTGTT CATCAGCCATGACATGGCGGTGGTCGAACGGGTCAGCCACCATGTGGGCGTCATGTATCTGGGTCGTATCGTCGAACTGG GGTCGCGCGTGCGCGTCTTCGAAAACCCGCAGCACCCCTATACCCAGGCCCTGATGAAGGCGGTGCCGATCGCCGACCCG CGCCGGCGCAAGTCCGAAAAGGACCTGAACTTCAAACCGATTCCCTCGCCCATCCATCCGATCGGCTATGAGCCCGAACC GTCGCGCTATATCGAGGTCGAGCCGGGCCATTACGTGCTGGATGGCGAATGGGCGGGCTATACGGTCGACCGCGACGCGA TCCATGCGGGGCAGGGCGGACACTGA Protein sequence : MLDQPIAQIKKLRVEFQTKDGPVVGVEDVSFEINPGETVCIVGESGSGKSVSSLSLMRLVEFGGGDIAGGQLLFDRRDGG ELDLATADQDYMRNIRGNEIGMIFQEPMTALNPVFTVGRQLTEGLRVHKGMNQSQAEERALELLRQVRIPEPERRLKQYP HELSGGMRQRVVIAMAMACEPRLLIADEPTTALDVTIQAEILALMDRLKRETGTAVMFITHDMAVVAQMADRVVVMFRGN KVEEGTVEEIFENPQHEYTKALLAAVPKLGEMHGKAAPEPMKLMGVADQRIEPIIGTESPLLTVKGLTTRFPVKGGFFRR TVANVHAVEDVSFTLNKGQTLSLVGESGCGKSSAGRSILRLVEPMAGEIDLDGVDIMQLDQSGLRKARLDMQMIFQDPFA SLNPQMQLLEQVAEPMRNYGVASGSELVDRVASLFDRVQLPRSFMRRYPHEMSGGQRQRIAIARALALNPKLIVADEAVS ALDVSVQAQVLNLMMELQADLGLSYLFISHDMAVVERVSHHVGVMYLGRIVELGSRVRVFENPQHPYTQALMKAVPIADP RRRKSEKDLNFKPIPSPIHPIGYEPEPSRYIEVEPGHYVLDGEWAGYTVDRDAIHAGQGGH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 3e-98 | 46 |
