Gene Information

Name : SPO2181 (SPO2181)
Accession : YP_167406.1
Strain : Ruegeria pomeroyi DSS-3
Genome accession: NC_003911
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2316132 - 2316920 bp
Length : 789 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence :
ATGGGCATCCGGCGCGGCAATTGCAATCGCTGCCCTGCGGCGAATGGGGGCAATCGCGGCTTGGGGCTGGACAGTGGCGG
TGGACGGGCCATTCTCTGCCCCGTAACCGCCCCCATAACCGCCCTGAGGCCGCGCGCCATGCTTCTGACCGTTGATACCG
TGAGCAAGACCTATCCGGGAGGGCGCCCGGTACTGCGCGGCGCCTCGATCACGCTGGATCGGGGGCAGAGCCTGGCGCTG
ACCGGCGAAAGCGGCAGCGGAAAGAGCACGCTGTTGAACCTGACCGGCGCGCTTGACGGGTTCGACAGCGGCGAGATCAC
GCTGGACGGGGTGGCGCTGTCGCAGCTTGACGATGCGGGCCGGGCGGCGCTGCGCCGCGACCGCGTGGCGCTGGTATTCC
AGCAGTTCAACCTGATCCCGGCGCTGAGCGTGGCGCAAAACCTGGCCTTTCAGGCGCGGCTGGCCGGGCGGCTGGATCGC
GGCTGGATCGACGAGATCACCGCCCGGCTGGGCCTGACCGAGCTGACCGGGCGCTATCCCGAGCAGCTTTCGGGCGGGCA
GCAACAGCGGGTCGCCATCGGCAGGGCCATGGCCGGGCGCCCGAAATTGCTGCTGGCGGACGAGCCGACCGGCAATCTGG
ACGAGACCGCCGCTGGCACCGTGCTGGATCTGATGCTGGAGCTGGTGCGCGACAGCGGCACCGCGCTGCTGCTGGTCACC
CATTCGCAGGCCATCGCCGCCCGGCTGGACCGGCGCGCGCATCTGACCGGCGGGCGGGTGGCCGCGTGA

Protein sequence :
MGIRRGNCNRCPAANGGNRGLGLDSGGGRAILCPVTAPITALRPRAMLLTVDTVSKTYPGGRPVLRGASITLDRGQSLAL
TGESGSGKSTLLNLTGALDGFDSGEITLDGVALSQLDDAGRAALRRDRVALVFQQFNLIPALSVAQNLAFQARLAGRLDR
GWIDEITARLGLTELTGRYPEQLSGGQQQRVAIGRAMAGRPKLLLADEPTGNLDETAAGTVLDLMLELVRDSGTALLLVT
HSQAIAARLDRRAHLTGGRVAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-26 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-26 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-26 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-26 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPO2181 YP_167406.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 9e-31 44
SPO2181 YP_167406.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 5e-19 44