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Name : amt-1 (SPO2093) Accession : YP_167323.1 Strain : Ruegeria pomeroyi DSS-3 Genome accession: NC_003911 Putative virulence/resistance : Unknown Product : ammonium transporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0004 EC number : - Position : 2230811 - 2232106 bp Length : 1296 bp Strand : + Note : identified by match to protein family HMM PF00909; match to protein family HMM TIGR00836 DNA sequence : TTGAAAAAAAGCGGCAAAAACAGGCATGTTTCCGGCAGGCCGCCTCTTTTTCCCGCGACTGAAATCCGCTCAACCGCTCC CGACACTCGCAATCGCAGTAAAGGAGAGCGGCCCATGAACGGAGCCGATACAGCCTGGATCATCGTGGCCACAGCCCTGG TCCTGTTCATGACATTGCCGGGGCTGGCCCTGTTCTATGGCGGCCTCGTTCGGGCCCGCAACGTGCTGAGCGTGTTCATG CACTGTTTCGCCATCGCCTGCCTGATGAGCATTCTGTGGCTGGTGGCGGGCTATTCCATCGCCTTTGGCGGCGGCACCTC GGGGTTTTGGGGTGGGCTGGACAAGGTGATGCTGATCGGCGTGACCGCCGACAGCCTCAGCGGTACATTGCCCGAGATCC TGTTCTTTGCCTTCCAGATGACCTTTGCCATCATCACCCCGGCGCTGATCGTCGGCGCCTATGTCGAGCGGGTGGGCTTC GGCTTTGTGCTCACCTTTTCGGGCCTCTGGATGCTGCTCTGCTATGCGCCGGTGGTGCACTGGATCTGGGGCGGCGGCAT GATGTCCGATGGCGGAATCTTTGGCGAGACCGGTGTGCGCGATTTCGCTGGCGGCATCGTCGTACACGAAACCGCCGGTC TGGCGGCGCTGATCATCGCCGTGATGCTGGGGCCGCGCCGCAACCGCACCACCCCGCCGCATAACCCCGGTTTCGTGATG ATCGGCGCGGCGATGCTGTGGGTGGGCTGGTTCGGCTTCAACGGCGGCTCGCAGCTGGCCGCTGATGGCGGTGCCGCCAT GGCGCTGACCGTCACCCATATCTCGGCCGCCACCGCCTCGCTCAGCTGGGCGCTGTGGGAGCGGATCAAATATGGCAAGG CGTCGCTGGTGGGTCTGGTCACCGGCACCATCGCCGGGCTGGCCTCGATCACGCCCGCCAGCGGTTTTGTCGGCCCCGCC GCCGCGCTGCTGATCGGCGCGGTCGCCGGTATCCTGTGTCAGGAGGCGGTCAATCTGGTGCGCAACTGGCTCAGGATCGA CGACACCCTCGACGTGTTCGCCGTGCACGGGGTCGGCGGCATCTTTGGCACCCTCATGATCGCCGTCCTCGGCGCCGGCA GCTGGGTCGCACAGCTGGGCGGGCTGGTGTTCGTGGGTCTCTTCACGACGGGTGTCACCATCGTGTTGGTCAAGGTGGTT GCACTTGTCACCCCGCTCAGGGTAGATGCCGAGACCGAAACAAACGGGCTCGACCTCTCCGTGCATGGTGAGCGGGCCTA TGACATGAGCAGCTGA Protein sequence : MKKSGKNRHVSGRPPLFPATEIRSTAPDTRNRSKGERPMNGADTAWIIVATALVLFMTLPGLALFYGGLVRARNVLSVFM HCFAIACLMSILWLVAGYSIAFGGGTSGFWGGLDKVMLIGVTADSLSGTLPEILFFAFQMTFAIITPALIVGAYVERVGF GFVLTFSGLWMLLCYAPVVHWIWGGGMMSDGGIFGETGVRDFAGGIVVHETAGLAALIIAVMLGPRRNRTTPPHNPGFVM IGAAMLWVGWFGFNGGSQLAADGGAAMALTVTHISAATASLSWALWERIKYGKASLVGLVTGTIAGLASITPASGFVGPA AALLIGAVAGILCQEAVNLVRNWLRIDDTLDVFAVHGVGGIFGTLMIAVLGAGSWVAQLGGLVFVGLFTTGVTIVLVKVV ALVTPLRVDAETETNGLDLSVHGERAYDMSS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00287 | YP_008207752.1 | Ammonia permease | Not tested | AbaR25 | Protein | 4e-52 | 45 |
| BJAB0868_00291 | YP_008211617.1 | Ammonia permease | Not tested | AbaR26 | Protein | 4e-52 | 45 |
