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Name : fliP (SPO0196) Accession : YP_165466.1 Strain : Ruegeria pomeroyi DSS-3 Genome accession: NC_003911 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : - Position : 215016 - 215759 bp Length : 744 bp Strand : - Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus DNA sequence : ATGAGGCGCGCAGCCCCTGTTCTGGCCGCGATCACCTTGTTGACCGGCGCGATGCTTGCCGGGCCGGTGGCCGCGCAGGA TATCTCCCTTTCGCTGGGAGAGGGTGGATCGGTATCGGCGCGCACGATCCAGCTGATCCTGTTGATCACCGTGCTCAGCC TGGCCCCCGGGCTGGCTATCATGATCACCTGCTTCCCGTTTCTGGTCACGGTTCTGGCGATCCTGCGCCAGGGGATCGGC TTGCAGCAGTCGCCTCCCAATATGCTCATCGTCAGCCTGGCGCTGTTTCTGACCTATTTCGTAATGGAGCCCGTGTTCAC CGAGGCCTGGACAACGGGTATCGCTCCGATGATGGCCGAGGAACTGGCGCTGGAACCCGCTTTGGAGAAAGCAATCGCGC CGTTCAAGGCCTTCATGGCCGCCCGGCTCGACGCGGATACGTTCTTTGCCATGGCCAATCTGCGGCCTGACGGTGCGGCG CTGACGGCGACTCCCGAAGCGCCGCTCTCGGTGCTGGTTCCCTCCTTCATGCTGTCAGAAATCGCGCGCGCGTTTCAGAT CGGTTTTCTGGTGTTTCTGCCGTTCCTGATCATCGATCTGGTGGTGGCTGCGGTGTTGATGTCGATGGGCATGATGATGG TGCCGCCGGCGACCGTGTCCCTCCCCTTCAAGCTGGCTTTCTTCGTGCTGGCGGATGGCTGGTCGCTTATCGCAAGCGCT TTGGTTCGCAGCTACATGCCCTGA Protein sequence : MRRAAPVLAAITLLTGAMLAGPVAAQDISLSLGEGGSVSARTIQLILLITVLSLAPGLAIMITCFPFLVTVLAILRQGIG LQQSPPNMLIVSLALFLTYFVMEPVFTEAWTTGIAPMMAEELALEPALEKAIAPFKAFMAARLDADTFFAMANLRPDGAA LTATPEAPLSVLVPSFMLSEIARAFQIGFLVFLPFLIIDLVVAAVLMSMGMMMVPPATVSLPFKLAFFVLADGWSLIASA LVRSYMP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YPO0270 | YP_002345352.1 | type III secretion system protein | Virulence | Not named | Protein | 1e-27 | 42 |
| lscR | AAO18040.1 | LscR | Virulence | TTSS locus | Protein | 9e-27 | 42 |
| XC_3016 | YP_244084.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 1e-27 | 41 |
| hrcR | NP_636600.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 1e-27 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | YP_165466.1 | flagellar biosynthesis protein FliP | VFG2494 | Protein | 9e-38 | 48 |
| fliP | YP_165466.1 | flagellar biosynthesis protein FliP | VFG1259 | Protein | 1e-36 | 45 |
| fliP | YP_165466.1 | flagellar biosynthesis protein FliP | VFG2338 | Protein | 7e-35 | 44 |
| fliP | YP_165466.1 | flagellar biosynthesis protein FliP | VFG2016 | Protein | 3e-35 | 43 |
| fliP | YP_165466.1 | flagellar biosynthesis protein FliP | VFG0188 | Protein | 3e-27 | 41 |
