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Name : tkt (SPO1865) Accession : YP_167102.1 Strain : Ruegeria pomeroyi DSS-3 Genome accession: NC_003911 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 1984235 - 1986256 bp Length : 2022 bp Strand : - Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo DNA sequence : GTGGACCTGACTGCGCTGCGCACTGCGAACCCCGACCACTGGACCAAGGCCACCGCCATCCGCGCCCTGACGCTGGATGC TATCGCGGCGGCAAATTCCGGCCATTCCGGCATGCCGATGGGCATGGCCGATGTCGCCACCGTGCTGTTCGAAAAGCACC TGAAATTCGACGCCGCCAACCCCACCTGGCCCGACCGCGACCGGTTCATCCTGTCGGCTGGCCATGGCTCGATGCTGCTC TATTCGCTGCTCTATCTCACCGGCAACCCCGAGATCACGCTGGATGAGGTGAAGAACTTCCGCCAGATGGGCGCCAAGAC CGCCGGCCACCCGGAAAACTTCCTTGCCAAGGGGATCGAGACCACCACCGGCCCGTTGGGTCAGGGCATCTCGAACGCCG TGGGCTTTGCCATCGCCGAGGAAATCCAGCGCGCGCAATACGGCAAGAAGGTCGTCGATCATTACACCTATGTGATCGCC GGTGACGGCTGCCTGATGGAGGGCGTCAGCCAGGAGGCGATCGGCCTTGCCGGCCGGCTGGAGCTGAGCAAGCTGGTCGT GTTGTGGGACAACAACAACATCACCATCGACGGCACCGTCGATATTGCCGACCGCACCGACCAGGTGCGCCGCTTTGCCG CCTCGGGCTGGCATGTGATCGAGATCGACGGCCATGACCCGGCCGCCATCGACGCCGCCCTGACCCAGGCCAAGGGCTCG AAAAAGCCCACGATGATCGCCTGCAAGACCCATATCGCTCTGGGCCACGCGGCACAGGACACCTCCAAGGGCCATGGCGC GCTCACCGATCAGGGCCAGCTTCTGGCCGCGAAAGAGGGTTATGGATGGGCACATGGCCCCTTCGAGGTGCCCTCGGACG TGAAATCCGCATGGGAGGCCATCGGCAGCCGGGGTGCCGCCGAGCGCGCCGCCTGGGAGGCCCGCTTTGCCGAGCTGAGC GAGCGCAAGCAGGCCGAATTCACCCGTGCCTATGCGTTCGAGGCGCCCAAGAAACTGGCCGGCGCCATCCGCGCGCTGAA AAAGCAGGTCTCGGAAGATCAGCCCAAATGGGCCACCCGCAAAAGCTCGGAAGAGGTGCTGAAGGTCGTCAACCCGATCA TGACCGAGACCGTCGGCGGCTCGGCCGACCTGACCGGGTCGAACAACACCAAGACCGCCGATCTGGGCATCTTCCTGCCG GAAAACCGCAAGGGCCGCTATATCCACTGGGGTATCCGCGAACATGGCATGGCGGCGGCGATGAACGGCATGGCGCTGCA TGGCGGTATCCGCCCCTATGGCGGCACCTTCATGTGCTTCACCGACTATGCCCGCCCGGCGATGCGCCTGGCCGCGCTGA TGAAGATCCCGTCGGTCTTCGTGATGACCCATGACTCGATCGGCCTGGGCGAGGACGGTCCGACCCACCAGCCGGTCGAA CATCTGGCAATCAGCCGCGCCACGCCCAACACCTATGTGTTCCGCCCCGCCGACACGGTAGAAACCGCCGAGGCCTGGGA ACTGGCACTGACCTTCCAGAACAGCCCCTCGGTGCTGTCGCTGACGCGCCAGAACCTGCCCACCCTGCGCACCGAGCACA AGGTCAAGAACCTGACCGCCCAGGGCGGCTATGTGCTGGCCGAGGCCACCGGCAAGCGTCAGGTGATCCTGATCGCCACC GGCTCCGAGGTCGAGATCGCCATGCAGGCGCGCGCAACGCTCGAGGCCGAGGGGATCGGCACCCGCGTGGTGTCGATGCC CTGCATGGAGCTGTTTGCCGAGCAGGACGAAGCCTATCGCAAGCGCGTGCTGCCCGCAGGCCCGGTGCGTGTCGGCATCG AGGCCGCGATGCGCGCTGGTGGCTGGGATCGCTGGCTGCTGGGCGAGCGCGGGCGCGAGGCCAAGGCAGGCTTTGTCGGC ATGACCGGCTTCGGCGCCTCGGCCCCGGCCGAAGAGCTTTATGAAAAGTTCGGCATCACCGCGGCCGCGACCGTGGCCAA GGTCAAGGACCTGCTGGGCTGA Protein sequence : MDLTALRTANPDHWTKATAIRALTLDAIAAANSGHSGMPMGMADVATVLFEKHLKFDAANPTWPDRDRFILSAGHGSMLL YSLLYLTGNPEITLDEVKNFRQMGAKTAGHPENFLAKGIETTTGPLGQGISNAVGFAIAEEIQRAQYGKKVVDHYTYVIA GDGCLMEGVSQEAIGLAGRLELSKLVVLWDNNNITIDGTVDIADRTDQVRRFAASGWHVIEIDGHDPAAIDAALTQAKGS KKPTMIACKTHIALGHAAQDTSKGHGALTDQGQLLAAKEGYGWAHGPFEVPSDVKSAWEAIGSRGAAERAAWEARFAELS ERKQAEFTRAYAFEAPKKLAGAIRALKKQVSEDQPKWATRKSSEEVLKVVNPIMTETVGGSADLTGSNNTKTADLGIFLP ENRKGRYIHWGIREHGMAAAMNGMALHGGIRPYGGTFMCFTDYARPAMRLAALMKIPSVFVMTHDSIGLGEDGPTHQPVE HLAISRATPNTYVFRPADTVETAEAWELALTFQNSPSVLSLTRQNLPTLRTEHKVKNLTAQGGYVLAEATGKRQVILIAT GSEVEIAMQARATLEAEGIGTRVVSMPCMELFAEQDEAYRKRVLPAGPVRVGIEAAMRAGGWDRWLLGERGREAKAGFVG MTGFGASAPAEELYEKFGITAAATVAKVKDLLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 7e-127 | 48 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 5e-128 | 47 |
