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Name : fliI (SPO0183) Accession : YP_165453.1 Strain : Ruegeria pomeroyi DSS-3 Genome accession: NC_003911 Putative virulence/resistance : Virulence Product : H+-transporting two-sector ATPase, flagellum-specific Function : - COG functional category : N : Cell motility COG ID : COG1157 EC number : 3.6.3.14 Position : 199455 - 200792 bp Length : 1338 bp Strand : + Note : identified by similarity to SP:P26465; match to protein family HMM PF00006; match to protein family HMM TIGR01026 DNA sequence : ATGACGGCCCCAGACCCCCTCGCCCTGAAAGCCGAGTTCGACAGCCTCAGCCTGGTTCGACATGTGGGGCGCGTGACCGG CGTGGCGGGGGGCGTGATCCAGATTCAGGGCCTCGCCCGGCAGGCGCAAATCGGCGATCGGGTTGAATTGAAACGCAATT TCGGCCCGTCCCTGGGTGGCGAGGTGTTGCAGGTCGAGGGCAGCACGATCAACATGCTGCCCGACAGCGCGCCCGAAGGT GTGTCGCTGGGCAACCGCGTGGTTTTGCATCCGATTCCGGGATTCGCACCCGGGCGTCACTGGCTGGGGCGGGTGGTCGA TCCGTTCGGGCGGCCGCTGGACGGGCGCCCCTTGATGCGTGGCTCCAAGGCGCGCGACCTGATGCGCGCGCCGCCGCCCG CCGTGCAACGCAAGCCCCTGGGTCAGCGTATGGCGACCGGGCTTGCAGCGCTGAACACGTTGCTGCCCATTGTGCGTGGC CAGCGGGTCGGCCTCTTTGCCGGATCAGGGGTCGGGAAATCCAGCCTGCTCGCCACGCTGGCCAAGTCGATGCAGGCCGA TGCCGTGGTGGTGGCGCTGATCGGCGAGCGGGGGCGCGAGGTCAACGAATTCGTGGCCAAGGCGCTGGGCCCCGAGGGGC TGGCGCGCTCGGTCATCGTCGCGGCCACTTCGGACCAATCGGCATTGGTACGCCGCCGCTGTGCCTGGGCGGCGATGACC GTGGCCGAGAGCCTGCGCGACGAGGGGTTGAATGTCCTCTACCTTGCGGATTCGATCACCCGTTTCGCCGAGGCGCATCG CGAGATCTCCGCCGCCATGGGCGAGGCTCCGGCACTCAGGGGCTATCCGCCCTCGGTCACACCGCTGATCACCGGCCTGT GCGAACGCGCCGGTCCGGGAACCGAGAAACAGGGCGATATCACCGGCGTTTTCAGTGTGTTGGTGGCAGGGTCGGACATG GACGAACCGGTCGCCGATATCCTGCGAGGCGTGCTGGACGGGCATATCGTGCTAAACCGCGAAATCGCAGAACGTGGCCG CTTTCCGGCCATCGACATCAGCCGCTCGGTCTCGCGCAGCCTGCCGGATGCGGCCACGCCCGAGCAGAATGCGCTGATCG GCGAGGCGCGTCGCCTGATCGGTGCCTATGAGCAATCCGAGGTGATGATCAAGGCGGGGCTCTATAGCGAGGGCGCTGAT CCGCTGCTGGATCAGGCGGTGCGCGTCTGGCCCGAGCTGGATGCATTTCTGGCCCGTTTGGACCCACAGGGGATCGAGCA CAGTTTCTCGCGTCTGCAACTGGTGTTGCGCCGCTCCAAGTCCGGCCCCCGCCATTAG Protein sequence : MTAPDPLALKAEFDSLSLVRHVGRVTGVAGGVIQIQGLARQAQIGDRVELKRNFGPSLGGEVLQVEGSTINMLPDSAPEG VSLGNRVVLHPIPGFAPGRHWLGRVVDPFGRPLDGRPLMRGSKARDLMRAPPPAVQRKPLGQRMATGLAALNTLLPIVRG QRVGLFAGSGVGKSSLLATLAKSMQADAVVVALIGERGREVNEFVAKALGPEGLARSVIVAATSDQSALVRRRCAWAAMT VAESLRDEGLNVLYLADSITRFAEAHREISAAMGEAPALRGYPPSVTPLITGLCERAGPGTEKQGDITGVFSVLVAGSDM DEPVADILRGVLDGHIVLNREIAERGRFPAIDISRSVSRSLPDAATPEQNALIGEARRLIGAYEQSEVMIKAGLYSEGAD PLLDQAVRVWPELDAFLARLDPQGIEHSFSRLQLVLRRSKSGPRH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YPO0267 | YP_002345348.1 | type III secretion system ATPase | Virulence | Not named | Protein | 2e-59 | 46 |
| lscN | AAO18044.1 | LscN | Virulence | TTSS locus | Protein | 2e-57 | 46 |
| ssaN | CAA70537.1 | secretion system apparatus | Virulence | SPI-2 | Protein | 5e-59 | 45 |
| ssaN | NP_456113.1 | putative type III secretion ATP synthase | Virulence | SPI-2 | Protein | 6e-58 | 45 |
| ssaN | NP_805086.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 6e-58 | 45 |
| ssaN | NP_460380.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 7e-59 | 45 |
| ssaN | YP_216423.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 4e-59 | 45 |
| hrcN | AAB06001.1 | HrcN | Virulence | Hrp PAI | Protein | 5e-58 | 42 |
| hrcN | ABA47275.1 | HrcN | Virulence | S-PAI | Protein | 5e-67 | 41 |
| hrcN | AAG33879.1 | HrcN | Virulence | Hrp PAI | Protein | 1e-52 | 41 |
| hrcN | NP_791227.1 | type III secretion cytoplasmic ATPase HrcN | Virulence | Hrp PAI | Protein | 7e-54 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliI | YP_165453.1 | H+-transporting two-sector ATPase, flagellum-specific | VFG2331 | Protein | 2e-67 | 46 |
| fliI | YP_165453.1 | H+-transporting two-sector ATPase, flagellum-specific | VFG0515 | Protein | 3e-59 | 45 |
| fliI | YP_165453.1 | H+-transporting two-sector ATPase, flagellum-specific | VFG1254 | Protein | 1e-64 | 43 |
| fliI | YP_165453.1 | H+-transporting two-sector ATPase, flagellum-specific | VFG2499 | Protein | 1e-64 | 42 |
