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Name : SPO1719 (SPO1719) Accession : YP_166959.1 Strain : Ruegeria pomeroyi DSS-3 Genome accession: NC_003911 Putative virulence/resistance : Virulence Product : TRAP dicarboxylate transporter subunit DctM Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1593 EC number : - Position : 1838069 - 1839346 bp Length : 1278 bp Strand : - Note : identified by match to protein family HMM PF00597; match to protein family HMM PF06808; match to protein family HMM TIGR00786 DNA sequence : ATGGATGTCGCGATCCTCTTCTCGATCTTTGTCGGCGGCCTGGTGCTGGGCATTCCGGTGGCCATTACGCTGGGTCTGTC GTCACTTGCCTATCTGATCGCTGCCGGCATGCCTCCGGTGGTGATGCCCCAGAAAATGTACGCAGGCATGGATGTATTCG TCCTGCTATCCATCCCAGGCTTCATCCTGGCCGGGAACCTGATGAACCAGGGCGGGATCACGGGCAGGATCATCCGCTTT GCCAATGCTCTCGTGGGGTGGATCAAGGGCGGGCTCGGACTGACCAACATCGCCGCTTCGATGCTGTTCGGGGGCATCAC CGGCACGGCTGTCGCCGATGCCGCCTCGCTTGGTGGCGTTCTGATCCCGGGCATGAAGAAGGCGGGCTACCCGGCCGATT TCTCGGCCGCAGTTACCGCGGCCTCATCAACTGTCGGCCCGATCATCCCGCCGTCGGTGCCCATGATCATCGTCGGGGCG CTTTCCGGGATCTCGGTCGGCAAGATGTTCCTCGCGGGCGCCATTCCGGGCATCCTGATGGGTATCGCAATGATGGTGAC GGCATATATCATTTCGGTGCGTCGCGGCTTCCCGCACCAACCCTGGCAAGGCTTCGGCGAGGTCGCGCGCTCGTTCGCAG GTGCGATCTGGGCCATCGCGATGACCTTCCTGATCATCTATGGGCTTCTCTCGGGGCTTGCCACGCCAACCGAGACGGCG GTGGTCGCCAGCGTCTATGCCTTCATCGTCGGCGCCTTCATCTACCGCGAACTGCCCCTCGGGAAAGTGCCGGGCATCGT CGCCAACAGCGCGGTCTCGGCGGCGGGTATCCTGGCGCTTGTCGGTTTTGCCAATGTCTTCGGGTGGATTCTCGTCTCTG AGCGGATCCCGCAGGCCATCGCCGATGGCGTGCTGTCGATAACGGACAACAAGTTCCTCGTCATTCTGCTGATCAACCTG CTGCTGCTTTTTGTCGGCATGTTCATGGAGACGATCGCGGCGCTGATCATCCTGTTCGTGCCGCTCCTGTCCTTGGCACA GGCGGTCGGAATCGATCCGCTGCACTTCGCCACCTTCGCGGTTCTGAACCTGATGATCGGCTTGACGACGCCGCCGGTCG GCGTCTGCCTTTTCGTCTGCGCCAATATCGCGCGCCTGCCGCTGGCCCCGGTGGTGCGCGCGATAATGCCCTTCCTTCTG ACCAATATCCTGGTGCTGCTCGCGGTCAGCTACTTCCCGCCGCTCGCTACCTGGCTTCCATCCCTGCTGATCCCCTGA Protein sequence : MDVAILFSIFVGGLVLGIPVAITLGLSSLAYLIAAGMPPVVMPQKMYAGMDVFVLLSIPGFILAGNLMNQGGITGRIIRF ANALVGWIKGGLGLTNIAASMLFGGITGTAVADAASLGGVLIPGMKKAGYPADFSAAVTAASSTVGPIIPPSVPMIIVGA LSGISVGKMFLAGAIPGILMGIAMMVTAYIISVRRGFPHQPWQGFGEVARSFAGAIWAIAMTFLIIYGLLSGLATPTETA VVASVYAFIVGAFIYRELPLGKVPGIVANSAVSAAGILALVGFANVFGWILVSERIPQAIADGVLSITDNKFLVILLINL LLLFVGMFMETIAALIILFVPLLSLAQAVGIDPLHFATFAVLNLMIGLTTPPVGVCLFVCANIARLPLAPVVRAIMPFLL TNILVLLAVSYFPPLATWLPSLLIP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0395_A1375 | YP_001217318.1 | hypothetical protein | Not tested | VPI-2 | Protein | 6e-54 | 44 |
| VPI2_0025c | ACA01842.1 | TRAP dicarboxylate transporter DctM subunit | Not tested | VPI-2 | Protein | 4e-54 | 44 |
| VC1777 | NP_231412.1 | hypothetical protein | Not tested | VPI-2 | Protein | 6e-54 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SPO1719 | YP_166959.1 | TRAP dicarboxylate transporter subunit DctM | VFG1110 | Protein | 2e-54 | 44 |
