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Name : SPO1549 (SPO1549) Accession : YP_166790.1 Strain : Ruegeria pomeroyi DSS-3 Genome accession: NC_003911 Putative virulence/resistance : Unknown Product : glycine betaine/proline ABC transporter ATP-binding protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG4175 EC number : 3.6.3.32 Position : 1633461 - 1634483 bp Length : 1023 bp Strand : + Note : identified by similarity to SP:P46920; match to protein family HMM PF00005 DNA sequence : GTGAGGTTCATGGGCAGTCCTGTCATTTCGGCAAGGAATGTGTGGAAGATATTCGGCAAGGATCCGGTTGGTTACCTGAA GACGCTGCAACCGGGTCGGTCGTTCGACGATATTCGCGCCGACGGCTATATCGCCGGGGTGCGGGATGTCTCGCTGGATG TGGCGCGGGGCGAGATGCTGGTGATCATGGGCCTGTCTGGCTCGGGCAAGTCGACACTGGTGCGCTGTTTCTCGCGCCTG CACGAGATCACCGGCGGCAGTATCGAGGTTGATGGCCAGATCATCGGCGATCTGAGCGAGAAGGACCTGATCGAGCTGCG CCGCAACAAGATGGGCATGGTGTTCCAGTCCTTTGGCCTGTTGCCGCACCGCACGGTGCTGGACAATGTGGCCTTTCCGC TGGAAATGCGCGGGCAGGACCGCCACACCCGGCGCAAGCGCGCGCTCGAGGTGATCGAACTGGTCGGCCTTGCCGGGCGC GAGGATTATTTCCCGCGCGAGCTGAGCGGCGGCCAGCAGCAGCGCGTCGGCATTGCCCGCAGCCTGGCGATCGAACCCGA TATCTGGTTCCTGGACGAGCCGTTTTCGGCGCTTGACCCGCTGATCCGGCGCGAGATGCAGGACGAATTCCTGCGGCTTC AGGCGATGCTGGGCAAGACCATCGTCTTTATCACCCATGATTTCGACGAGGCGCTGCGCCTGGCCGACCGGATCGCCATC ATGAAGGACGGCGCGGTCGAACAATGCGACACGCCCGATCAGATCGTGATGAACCCGACCACCGGCTATGTCGCCAAGTT CACCGAAGAGATCGACAAGGCCCGTGTGGTGCATGCCGGTGTTCTGGCGCGCGCGGGGGTCGTGGGCGAGGGCCAGCCGG TCGAGGCCGGGGCAACCGTGCAGCAGCTGGCGCGCCTGTTGGTCAACGACAGCCGCGACCTGATCCCGGTTGCCGACAAG GGGCAGGTGATCGGGGCGCTCGACCGTCAGGGCGCGCTCGACATCCTGTTGAAGGCAAGCTGA Protein sequence : MRFMGSPVISARNVWKIFGKDPVGYLKTLQPGRSFDDIRADGYIAGVRDVSLDVARGEMLVIMGLSGSGKSTLVRCFSRL HEITGGSIEVDGQIIGDLSEKDLIELRRNKMGMVFQSFGLLPHRTVLDNVAFPLEMRGQDRHTRRKRALEVIELVGLAGR EDYFPRELSGGQQQRVGIARSLAIEPDIWFLDEPFSALDPLIRREMQDEFLRLQAMLGKTIVFITHDFDEALRLADRIAI MKDGAVEQCDTPDQIVMNPTTGYVAKFTEEIDKARVVHAGVLARAGVVGEGQPVEAGATVQQLARLLVNDSRDLIPVADK GQVIGALDRQGALDILLKAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuAA | YP_281521.1 | glycine betaine transport ATP-binding protein | Not tested | Not named | Protein | 5e-63 | 43 |
| opuBA | NP_938494.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 5e-38 | 42 |
| opuBA | YP_005124363.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 3e-38 | 42 |
