Gene Information

Name : SPO1495 (SPO1495)
Accession : YP_166736.1
Strain : Ruegeria pomeroyi DSS-3
Genome accession: NC_003911
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1569268 - 1569975 bp
Length : 708 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence : 
TTGACCGAGAACACGTATACCATTCGAAATCTAAAGAAGATTTACGGCCACGGAGAGACCGCCGTTCATGCCCTGCGGGG
TGTCGATCTGGACATTCCGGCGGGCGAGTTCGTGGTCCTGCTCGGGGCCTCGGGCAGCGGGAAATCGACGCTTCTCAACA
TTATCGGAGGGCTCGACAGGGCCAGCGAAGGAACCGCGCTGTTTCGTGATCGCGAACTGACCACGATGTCGGACAGCGAA
CTGACCCGATACCGGCGCGACCATGTGGGCTTTGTCTTTCAGTTCTACAACCTGATGCCCAGCCTGACCGCGCGCGAGAA
TGTCGAGCTGGTGACCGAGATCGCCCGCGATCCGATGGATGCCGATACCGCGCTGGCGCTGGTGGGGCTGGCCGAGCGGG
CCGGGCATTTTCCCGCCCAGCTCTCGGGCGGGGAACAGCAGCGGGTGGCAATTGCCCGCGCGGTGGCCAAACAGCCCGAT
GTGCTGTTCTGCGACGAACCCACGGGCGCGCTGGACAGCACCACGGGGCGCGCGGTGCTGCAAGTGCTCAAGGAGGTGAA
CGAACGCCTGGGCGCCACCGTGCTGGTGGTCACCCATGCGGCGTCGCAGGCGGCCATGGCCGACCGGGTGATCCGGTTCG
GCGACGGGCAGGTGATCGAGGTCAAGGTGAACGAGACCAAGCTGACCCCGGAGCAGATCGAATGGTAG

Protein sequence : 
MTENTYTIRNLKKIYGHGETAVHALRGVDLDIPAGEFVVLLGASGSGKSTLLNIIGGLDRASEGTALFRDRELTTMSDSE
LTRYRRDHVGFVFQFYNLMPSLTARENVELVTEIARDPMDADTALALVGLAERAGHFPAQLSGGEQQRVAIARAVAKQPD
VLFCDEPTGALDSTTGRAVLQVLKEVNERLGATVLVVTHAASQAAMADRVIRFGDGQVIEVKVNETKLTPEQIEW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-33 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPO1495 YP_166736.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 2e-51 52
SPO1495 YP_166736.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-33 45
SPO1495 YP_166736.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 4e-43 44
SPO1495 YP_166736.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 6e-41 42