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Name : ctaD (SPO1383) Accession : YP_166625.1 Strain : Ruegeria pomeroyi DSS-3 Genome accession: NC_003911 Putative virulence/resistance : Unknown Product : cytochrome c oxidase, aa3-type, subunit I Function : - COG functional category : C : Energy production and conversion COG ID : COG0843 EC number : 1.9.3.1 Position : 1449390 - 1451048 bp Length : 1659 bp Strand : - Note : identified by similarity to SP:P33517; match to protein family HMM PF00115 DNA sequence : ATGGCAGACGCAGCCATTCATGGTCACGGGCATGAGGACAATCGCGGTTTCTTTACCCGCTGGTTCATGTCGACCAACCA CAAGGACATCGGGATCCTGTACCTGATCTTTTCGGCGCTGGCCGGTCTGATCTCGGTGCTGATGACCGTCTACATGCGGC TCGAACTGATGGAGCCGGGCGTTCAGTACATGTGTCTGGAAGGCTTCATGGCCGATCCCTGCACGCCGAACGGCCATCTG TGGAACGTGATGATCACCTATCACGGCGTCCTGATGATGTTCTTTGTCGTCATCCCGGCCCTGTTCGGCGGTTTCGGCAA CTTCTTCATGCCGCTGCAGATCGGTGCGCCGGACATGGCGTTCCCGCGCATGAACAACCTCAGCTTCTGGCTCTATGTCG CCGGCACCTCGCTGGGCGTGGCCTCGATGCTGACGCCGGGTGGCAACGACCAGCTGGGCTCGGGCGTGGGCTGGGTTCTG TACCCGCCGCTGTCGACGACCGAAGGCGGCATGTCGATGGATCTGGCAATCTTTGCCGTGCACCTGTCGGGCGCCTCCTC GATCCTGGGTGCGATCAACATGATCACCACCTTCCTGAACATGCGCGCGCCGGGGATGACCCTGTTCAAGGTACCGCTGT TCGCATGGTCGATCTTCGTGACCGCCTGGCTGATCCTGCTGTCGCTGCCGGTTCTTGCCGGCGCCATCACCATGCTGCTG ATGGACCGCAACTTCGGCTTCACCTTCTTTGATCCGGCAGGCGGCGGCGACCCGATCCTGTACCAGCACATCCTGTGGTT CTTCGGCCACCCGGAAGTGTACATCGTGATCCTGCCCGGCTTCGGCATCATCTCCCACGTGATCGCCACCTTCTCGCGCA AGCCCGTCTTCGGCTATCTGCCGATGGTCTGGGCGATCATCGCGATCGGCGTTCTGGGCTTCGTCGTCTGGGCGCACCAC ATGTACACCGTCGGCATGAGCCTCAACCAGCAGGCCTATTTCATGCTGGCCACGATGGTCATCGCGGTACCCACCGGGGT GAAGGTGTTCAGCTGGATCGCCACAATGTGGGGCGGCTCGATCGAGTTCAAGACGCCGATGCTGTTCGCCTTCGGCTTCC TGTTCCTGTTCACCGTGGGCGGCGTGACCGGCGTGGTGCTCAGCCAGGCGGCCGTGGACCGGGCCTATCACGACACCTAT TACGTGGTTGCGCACTTCCACTATGTGATGAGCCTGGGTGCCGTGTTCGCCATCTTCGCCGGCATGTATTTCTACTTTGC CAAGATGACGGGCCGCCAGTACTCCGAGTTCTGGGGCAAGATCCACTTCTGGATGTTCTTCATCGGCGCAAACCTGACCT TCTTCCCCCAGCACTTCCTGGGCCGTCAGGGCATGCCGCGCCGCTACATCGACTACCCGGAAGCCTTTGCCTATTGGAAC AAGATCTCGTCCTATGGCGCGTTCATCTCCTTCGCTTCGTTCTTGCTGTTCTTCGGCATCGTGTTCTATGCGCTGACCCG TGGCGCCCGCGAAACCCGCAACAACTACTGGAACGAGTATGCGGATACGCTGGAGTGGACGCTGCCCACCCCGCCGCCGG AACACACGTTCGAGACCCTGCCCAAGCAGGAAGACTGGGACAAGGGCCACGCGCACTAA Protein sequence : MADAAIHGHGHEDNRGFFTRWFMSTNHKDIGILYLIFSALAGLISVLMTVYMRLELMEPGVQYMCLEGFMADPCTPNGHL WNVMITYHGVLMMFFVVIPALFGGFGNFFMPLQIGAPDMAFPRMNNLSFWLYVAGTSLGVASMLTPGGNDQLGSGVGWVL YPPLSTTEGGMSMDLAIFAVHLSGASSILGAINMITTFLNMRAPGMTLFKVPLFAWSIFVTAWLILLSLPVLAGAITMLL MDRNFGFTFFDPAGGGDPILYQHILWFFGHPEVYIVILPGFGIISHVIATFSRKPVFGYLPMVWAIIAIGVLGFVVWAHH MYTVGMSLNQQAYFMLATMVIAVPTGVKVFSWIATMWGGSIEFKTPMLFAFGFLFLFTVGGVTGVVLSQAAVDRAYHDTY YVVAHFHYVMSLGAVFAIFAGMYFYFAKMTGRQYSEFWGKIHFWMFFIGANLTFFPQHFLGRQGMPRRYIDYPEAFAYWN KISSYGAFISFASFLLFFGIVFYALTRGARETRNNYWNEYADTLEWTLPTPPPEHTFETLPKQEDWDKGHAH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1478 | YP_001800872.1 | cytochrome c oxidase subunit I | Not tested | Not named | Protein | 9e-79 | 46 |
