Gene Information

Name : CPS_0931 (CPS_0931)
Accession : YP_267680.1
Strain : Colwellia psychrerythraea 34H
Genome accession: NC_003910
Putative virulence/resistance : Unknown
Product : oxidoreductase, zinc-binding
Function : -
COG functional category : R : General function prediction only
COG ID : COG2130
EC number : -
Position : 936638 - 937681 bp
Length : 1044 bp
Strand : -
Note : identified by match to protein family HMM PF00107

DNA sequence :
ATGAATCAAAACAAACAAGTAAATCGACAAATATTGTTAGCTTCACGTCCTTTTGGTGCGCCAAGCCACGACAACTTTAC
ACTAGCACAAACAGCCAAGCCTAGCCCAAAACAGGGTGAAGTATTATTACGTACGGTATATCTTTCATTAGATCCCTATA
TGAGAGGTCGTATGAATGATGCAAAATCTTACGCCGATCCCGTAGCATTAAATGAGGTAATGGTTGGTGGCACTGTTTGT
AGAGTCGAAGAATCGAAGCATGCTGATTACCAACAAGGAGATTGGGTTGTTTCTTTTGGTGGCTGGCAGGATTACAGCAT
ATCAAATGGCGTTGACCTACTTAAGTTAGGTAATGATATTTCAAACCCATCTTATGCACTAGGAGTTCTCGGTATGCCGG
GTTTAACTGCCTATATGGGATTATTAGATATTGGCCAACCAAAAGCTGGGGAGACAGTTGTCGTCGCAGCTGCAACAGGT
GCCGTAGGTAGTTTAGTAGGGCAAATTGCTAAAATACAAGGCTGTAAAGTGATTGGTATAGCGGGTGGTACTGAGAAGTG
CCAATATGCCGTTGATACCCTTGGTTTTGATGCCTGTTTAGATCACCACAGTGATGAATTAGCTACCCTACTGGCAAAAA
CTTGTACTGATGGTATCGACGTTTACTTTGAAAATGTTGGCGGTAAAGTCTTTGATGCCGTATTACCGCTACTTAATCCT
AAGTCTCGTATTCCTTTATGTGGCCTTATTTCACAATATAATGCCACTGAATTACCTGATGGTCCTGATCGTATGTCTTC
GTTAATGGGCACATTATTGGTTAAGCGCGCTAAAATGCAAGGTTTCATCGTATTTGATGACTATGGCCACCGTTATGGCG
AATTTAATAAAGCGATGATGACATGGCTTAGTGAAGGAAAGATCAAATACAAAGAGCACAGAGTAGAAGGCTTAGAAAAT
AGCGTATCGTCATTTATTGGTTTGTTGGAAGGCAAGAACTTTGGCAAGTTAGTAGTTCGTGTTGGTCCTGATGACTTAAC
ATAA

Protein sequence :
MNQNKQVNRQILLASRPFGAPSHDNFTLAQTAKPSPKQGEVLLRTVYLSLDPYMRGRMNDAKSYADPVALNEVMVGGTVC
RVEESKHADYQQGDWVVSFGGWQDYSISNGVDLLKLGNDISNPSYALGVLGMPGLTAYMGLLDIGQPKAGETVVVAAATG
AVGSLVGQIAKIQGCKVIGIAGGTEKCQYAVDTLGFDACLDHHSDELATLLAKTCTDGIDVYFENVGGKVFDAVLPLLNP
KSRIPLCGLISQYNATELPDGPDRMSSLMGTLLVKRAKMQGFIVFDDYGHRYGEFNKAMMTWLSEGKIKYKEHRVEGLEN
SVSSFIGLLEGKNFGKLVVRVGPDDLT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0097 YP_252012.1 hypothetical protein Not tested SCCmec Protein 2e-58 47