Gene Information

Name : CPS_0900 (CPS_0900)
Accession : YP_267649.1
Strain : Colwellia psychrerythraea 34H
Genome accession: NC_003910
Putative virulence/resistance : Unknown
Product : phage integrase family site specific recombinase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 901027 - 902031 bp
Length : 1005 bp
Strand : +
Note : identified by match to protein family HMM PF00589

DNA sequence :
ATGAAGAAAATTAAAAAAGTACAAGATGGAATTTGGAAAACCGATTCAGAAAGTAAGCCTTATCAAATTGACTTTAGACC
TAATGGCCACCACGGCAAACGATACAAAAAAAGCTTCTTAACACTTGGTGAAACAAGGCGGTTTATGAACCATTTAATTT
CAGAAAATAATGGTTTAAAAGAATGGCAACCTGATACAGACGATAATCGAAAGTTAAGCACAATTATTGATTTATGGCAT
AAGTTACATGGCAAAAATTTAATTGAAGAAAAAGCGCTACTTCAAAAGTTAAAAAATATGTGTAAAGGACTTAATGATCC
TATTGCTAGAAAGTTAACGCCTAAAGTATGGGTAGCATACAGAGCTATAAGATTAGAGAAAGTATGCGCTAAAACTGTAA
ATGAAGACCAAAATAAAATTAAAGGCGTATTTAATGAGCTGATAAGGCTTGGGGAATTAAAAACAAACCCACTAAACGGG
CTTAAAAACTTAAAGTATTCAGCGCCTGAAATGGGATTCTTTTCAAAGAACGAAATGATGACCTTATTAAATGAGCTAAA
GAACTCAGACAATATTGATGCTTATTACATTTCAAAAATATGTTTATCAACTGGTGCAAGGTGGGGAGAAGCTGAAAAAC
TACTAAGTAGAAACTTAAGAGACAACTTCATTACATTCATTAAAACCAAAAATGGCAAGACAAGAATAATCCCCATATCA
GACGAGCTTAAAAATGAAATACCCGAAAAAGAGGGTAGATTGTTTAGTGACAGCATGAAAACATTTAGAACGTCATTAGC
TAAGACCGGTATAACACTCCCCAAAGGACAAGCTACACATGCTTTAAGACATACATTTGCTAGTCATTTTATGATGAATG
GCGGGAATATTCTGGTACTAAAAGAAATACTCGGACATGCACGAATTGAAGAAACTATGAAGTATGCACACTTTTGTAAA
ACACACTTACACGATGCCGTGATGCTAAATCCAATCAGTAAATAA

Protein sequence :
MKKIKKVQDGIWKTDSESKPYQIDFRPNGHHGKRYKKSFLTLGETRRFMNHLISENNGLKEWQPDTDDNRKLSTIIDLWH
KLHGKNLIEEKALLQKLKNMCKGLNDPIARKLTPKVWVAYRAIRLEKVCAKTVNEDQNKIKGVFNELIRLGELKTNPLNG
LKNLKYSAPEMGFFSKNEMMTLLNELKNSDNIDAYYISKICLSTGARWGEAEKLLSRNLRDNFITFIKTKNGKTRIIPIS
DELKNEIPEKEGRLFSDSMKTFRTSLAKTGITLPKGQATHALRHTFASHFMMNGGNILVLKEILGHARIEETMKYAHFCK
THLHDAVMLNPISK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4645 NP_458725.1 phage integrase Not tested SPI-7 Protein 6e-63 45
t4338 NP_807932.1 phage integrase Not tested SPI-7 Protein 6e-63 45