Gene Information

Name : CPS_0775 (CPS_0775)
Accession : YP_267524.1
Strain : Colwellia psychrerythraea 34H
Genome accession: NC_003910
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 792878 - 793609 bp
Length : 732 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGACTGCACTTATCACCTTAAAAAATATTAGCAAAAAATTCTTAACTGAAGAGATAGAAACGCGGGCTTTAAATACTAT
TAACCTAGAGATTAATAAGGGGGAATACCTGTCACTCAGTGGTCAGTCAGGTTGTGGTAAATCAACCTTACTCTCTTTAC
TAGGATTATTAGATGCACCTAGTTCAGGACATTATCATTTAGCAGGTAGTGATGTTTCAGCTTTAACACGGGATCAACGA
GCAAAAATACGCAGTGAACAAATAGGGTTTGTTTTTCAATCGTTTAATTTGATTTCAGATCTCACGGTATTTGAAAATGT
TATGTTACCGTTGACGTATCAAACAGGAAAGTCTAAAAAAGCCATTGAAGCTAAAGTGAATGAAGTATTAGCGAAAGTAG
AAATGGGACATCGTAAAAATCATTACCCTTCACAATTATCTGGCGGACAACAACAGCGTGTTGCCGTTGCTAGAGCCTTA
GTTAATGACCCTGCAATTATTCTTGCCGATGAACCAACAGGTAACTTAGATTCAAAAAATGCCGAGGCAGTTTTACAGCT
ATTCGATCAACTTCATCATGATGGCGCAACTATCTGCATGGTGACCCATGATCCCTCGTCAGCGAAGAGAGCGAGTAGGT
GTTTAGAAATGTTTGATGGGCAACTGATCAAAGACAATATCAATCATGATCGTCAAGTAACGCTTAAACCAGTTGAATTG
GCTGCGGGCTAA

Protein sequence : 
MTALITLKNISKKFLTEEIETRALNTINLEINKGEYLSLSGQSGCGKSTLLSLLGLLDAPSSGHYHLAGSDVSALTRDQR
AKIRSEQIGFVFQSFNLISDLTVFENVMLPLTYQTGKSKKAIEAKVNEVLAKVEMGHRKNHYPSQLSGGQQQRVAVARAL
VNDPAIILADEPTGNLDSKNAEAVLQLFDQLHHDGATICMVTHDPSSAKRASRCLEMFDGQLIKDNINHDRQVTLKPVEL
AAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-26 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-26 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-26 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-26 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-30 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CPS_0775 YP_267524.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 6e-41 49
CPS_0775 YP_267524.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 6e-38 48
CPS_0775 YP_267524.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-28 43
CPS_0775 YP_267524.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 9e-26 42
CPS_0775 YP_267524.1 ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 1e-21 41