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Name : ribD (CPS_0730) Accession : YP_267480.1 Strain : Colwellia psychrerythraea 34H Genome accession: NC_003910 Putative virulence/resistance : Unknown Product : riboflavin biosynthesis protein RibD Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0117 EC number : 1.1.1.193 Position : 731492 - 732661 bp Length : 1170 bp Strand : + Note : identified by match to protein family HMM PF00383; match to protein family HMM PF01872; match to protein family HMM TIGR00227; match to protein family HMM TIGR00326 DNA sequence : ATGTCTAGGGCTATAGATTTAGCTAAAAAAGGACATTTCACTACTTCTCCCAACCCTAGAGTTGGTTGTGTGTTAGTGAG CTATAAAGAAGGTGTTGGTAAGGTCATTGGTGAAGGTTATCATCAAAAAGCTGGGCAGGGTCATGCAGAAGTTAATGCGT TAGCTGAGGCAAAAGTGAACAATCCCGCTTTAATCAAGGGGGCTACAGCCTATGTTACCCTTGAGCCTTGCAGCCATTTT GGCCGTACGCCGCCATGTGCCAAAGCATTAGTTGATGCTGGTGTTAGTCATGTTATTGCCGCTATGGTTGATCCCAATCC ACAAGTTTCTGGTAATGGTTTATCTCTATTAGAAAAAGCGGGCATCACGGTACAATCGGGTTTGTTAGAACAAAGCGCAA GGCTACTCAACGTCGGGTTTATTCATAAGATGGTCAATAATCTTCCATATGTACGCTGTAAATTAGCAGCGAGTCTTGAT GGAAAAACAGCCATGGCCAGTGGCGAAAGTAAATGGATTACGTCAGCAGATGCTCGACAAGATGTTCAACGTCTACGCGC CCAGAGTTGCGCGATTATCACAGGTGCAGATTCAGTACTTTTTGATAATGCTAAGATGACAGTACGTTGGTCTGAGCTAG GTGAGTTAAAAAGTAACTACCCAAAAGAAGCCCTTCGTCAGCCTTTACGTATTGTAATTGATAGTCAAAATAGACTGACG CCAAACCTTGCATTATTCGAACATCAGTCACCAATTTTAATTATTAATGGCATAGATCCGGACTACGTTGAAAATAAAAT TGAATCACATCTTGAAAACTTACCAAAATGGCCGCATTTCGTAGAACAGGTGCAATTACCTGTGACTGAAAACTCGCAGG GTAAATTGAAAATAAATTTAAAGGCTTTGTTAGAATACCTAGCAAAGCGAGGGCTCAATGATATTTTAATTGAGTCAGGC GCACGGTTAAGTGGTGCCTTTATTGAACAAAATTTAGTGAATGAACTTATTCTGTATCAAGCGCCCAAATTAATGGGTGG CGATGGTAAAAACTTAATGGAAATGCCCTCAGTATCAAAGCTGAACCAAGCCAAGGCATTAACTATTAGTGATATTCGTA TGGTTGGTGTGGATATTCGCATCACTAGCCAACTTACTAATACTGAATAA Protein sequence : MSRAIDLAKKGHFTTSPNPRVGCVLVSYKEGVGKVIGEGYHQKAGQGHAEVNALAEAKVNNPALIKGATAYVTLEPCSHF GRTPPCAKALVDAGVSHVIAAMVDPNPQVSGNGLSLLEKAGITVQSGLLEQSARLLNVGFIHKMVNNLPYVRCKLAASLD GKTAMASGESKWITSADARQDVQRLRAQSCAIITGADSVLFDNAKMTVRWSELGELKSNYPKEALRQPLRIVIDSQNRLT PNLALFEHQSPILIINGIDPDYVENKIESHLENLPKWPHFVEQVQLPVTENSQGKLKINLKALLEYLAKRGLNDILIESG ARLSGAFIEQNLVNELILYQAPKLMGGDGKNLMEMPSVSKLNQAKALTISDIRMVGVDIRITSQLTNTE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 6e-55 | 43 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 6e-55 | 43 |
