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Name : CPS_0592 (CPS_0592) Accession : YP_267342.1 Strain : Colwellia psychrerythraea 34H Genome accession: NC_003910 Putative virulence/resistance : Virulence Product : capsular polysaccharide biosynthesis protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : - Position : 595062 - 596066 bp Length : 1005 bp Strand : + Note : identified by similarity to GP:3093975; match to protein family HMM PF01370; match to protein family HMM PF07993 DNA sequence : ATGAAATATTTAGTAACTGGCGCTGCTGGTTTTATTGGTAGTGCTGTTGTTGAACGCTTGTGTGCAGCAGGACATGACGT CGTTGGTATCGATAATATTAATGACTATTATGATATTGCATTAAAGCAAGCACGTTTAGCACGAATAGAACATGCATCGT TTAGCTTTATCAAGATGGATATTGCTGATCGCAATGTTATGGCCGAGTTATTCACAGCTCAGCAGTTTGATAAAGTAGTG CATTTGGCAGCTCAAGCCGGTGTGCGTTATTCAATTGAAAATCCAATGGCTTATGCTGACAGTAACTTGATTGGTCACTT AAATGTATTAGAAGGTTGCCGAAATAATCAGGTAAAACATTTGATTTATGCCTCTTCGAGCTCTGTTTATGGCTTAAATA ATAAGGTACCCTTTTCAACTAAAGACACTGTTGATCATCCTGTGTCATTGTACGCCGCAACTAAAAAGTCTAATGAATTA ATGGCACACAGCTATTCCCATTTATATAATATTCCTACTACAGGTTTACGATTTTTTACTGTTTATGGTTCATGGGGGCG TCCTGATATGGCCCCTTATATTTTCACTAAAAAAATATTGAATGGCGATACTATCGACATAAACAATAATGGTGATATGT GGCGTGATTTTACTCATGTTGACGATATTGTTGAGGGTGTTATCCGCATTGCTGATGTGATTCCTGAACGTGATGCAGAG TGGAAAGTTGAAAGTGGCAGCCCTGCTACTAGCTCAGCACCCTATTCAGTCTATAATATTGGCCATGGCTCACCAATCAG CTTAATGGACTTTGTTAAAGCCATTGAAGATGAGTTAGGTATTGAAGCGAAAAAGAACTTTCGTGAAATGCAACCTGGTG ATGTATATCAAACCTATGCAGATACCCAAGATTTATTTAAGGCGACAAATTATGTGCCTAAGATATCTGTTAAAGAAGGT GTCGCCGAGCTTGTGGTTTGGTTTAAAGACTTCTATAAAATATAA Protein sequence : MKYLVTGAAGFIGSAVVERLCAAGHDVVGIDNINDYYDIALKQARLARIEHASFSFIKMDIADRNVMAELFTAQQFDKVV HLAAQAGVRYSIENPMAYADSNLIGHLNVLEGCRNNQVKHLIYASSSSVYGLNNKVPFSTKDTVDHPVSLYAATKKSNEL MAHSYSHLYNIPTTGLRFFTVYGSWGRPDMAPYIFTKKILNGDTIDINNNGDMWRDFTHVDDIVEGVIRIADVIPERDAE WKVESGSPATSSAPYSVYNIGHGSPISLMDFVKAIEDELGIEAKKNFREMQPGDVYQTYADTQDLFKATNYVPKISVKEG VAELVVWFKDFYKI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1I | AAA64648.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-89 | 55 |
