Gene Information

Name : ugd (CPS_0591)
Accession : YP_267341.1
Strain : Colwellia psychrerythraea 34H
Genome accession: NC_003910
Putative virulence/resistance : Virulence
Product : UDP-glucose 6-dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : 1.1.1.22
Position : 593724 - 594890 bp
Length : 1167 bp
Strand : +
Note : identified by similarity to SP:P76373; match to protein family HMM PF00984; match to protein family HMM PF03720; match to protein family HMM PF03721

DNA sequence : 
ATGAAAATTGCTATTGCAGGTACAGGTTACGTAGGTTTATCAAATGCTATGTTGTTAGCGCAACACAATGAGGTTATTGC
CGTTGACATTATTGCTGAAAAAATAGAATTACTCAATTCAGGTAAATCTCCCATTGAAGATACTGAGATTTCCGACTTTT
TAGCAAATCGTGAGCTTAACTTTACCGCTACCTTAGATAAAGAAGCGGCTTATGCGGGTGCTGATTATGTTATTATTGCA
ACACCTACTGATTACGACCCAGAAACTAATTACTTTAATACCGCTTCAGTTGAGTCGGTTATTAAAGATGTTATGGCTAT
CAACCCCTCTGCTTGTATGGTGATTAAATCAACCGTACCTGTTGGTTATACTGCACGGATACGAGAAGAGTTAGGTTGTG
AAGGGCTTATTTTTTCCCCTGAATTTTTACGTGAAGGCAAAGCACTGCATGATAACCTTTATCCTTCACGTGTTATTGTT
GGTGAGGATTCTGACCGAGCACGTAAGTTTGCAGGGCTGTTAACTGAAGGTGCTTGGAAAGAAAATATTGATGTTTTGTT
TATCCGTTCTACGGAAGCCGAAGCGGTTAAACTATTCTCTAATACCTATTTAGCGATGCGAGTCTCTTACTTTAATGAAC
TTGATACTTATGCTGAGGTTCATGATTTAGATTCTCGCCATATTATTGAGGGTGTAAGCTTAGATCCCCGTATAGGAAAT
CATTACAACAACCCTTCATTTGGCTATGGTGGCTATTGCTTGCCAAAAGATACCAAGCAATTACGCGCGAATTATAAAGA
TGTGCCTAATAATATTATTAGCGCGATTGTCGATGCTAATAGCACACGTAAAGATTTTGTTGCCGACTCAATTATTGCAA
GAAGTCCTAAAGTTGTCGGTATTTATCGATTAATTATGAAAGCGGGATCCGATAATTTTAGAGCATCATCTATTCAAGGT
ATTATGAAACGAATTAAAGCTAAGGGTATCGATGTTGTAATATATGAACCGGTAATGGAAGAAGATGAATTTTATCATTC
AAAAGTGATTAAAAGTTTGTCGGAATTTAAAGCTATGTCTAATGTGATTGTTTCTAACCGAATGGTTGATGAGTTAATTG
ATGTAGTTGATAAAGTTTATACACGTGATTTATTCGGTAGTGATTAG

Protein sequence : 
MKIAIAGTGYVGLSNAMLLAQHNEVIAVDIIAEKIELLNSGKSPIEDTEISDFLANRELNFTATLDKEAAYAGADYVIIA
TPTDYDPETNYFNTASVESVIKDVMAINPSACMVIKSTVPVGYTARIREELGCEGLIFSPEFLREGKALHDNLYPSRVIV
GEDSDRARKFAGLLTEGAWKENIDVLFIRSTEAEAVKLFSNTYLAMRVSYFNELDTYAEVHDLDSRHIIEGVSLDPRIGN
HYNNPSFGYGGYCLPKDTKQLRANYKDVPNNIISAIVDANSTRKDFVADSIIARSPKVVGIYRLIMKAGSDNFRASSIQG
IMKRIKAKGIDVVIYEPVMEEDEFYHSKVIKSLSEFKAMSNVIVSNRMVDELIDVVDKVYTRDLFGSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 8e-94 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ugd YP_267341.1 UDP-glucose 6-dehydrogenase VFG0963 Protein 7e-99 53