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Name : CPS_4965 (CPS_4965) Accession : YP_271604.1 Strain : Colwellia psychrerythraea 34H Genome accession: NC_003910 Putative virulence/resistance : Unknown Product : transcription accessory protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 5273437 - 5275827 bp Length : 2391 bp Strand : - Note : identified by similarity to SP:Q45388; match to protein family HMM PF00575 DNA sequence : ATGTTAACTATTGCCGAGCAAATAGCTCAAGAACTCAATGTTAACGCGGTACAAATTAATGCCGCTATTACCTTACTTGA TGATGGTGCTACTGTGCCATTTATTGCCCGTTACCGTAAAGAAGCTACTCAAGGCTTAGACGATAACCATCTTCGTCATT TAGCACAGCGCTTAAGCTATTTACGCGAGCTAGAAGACCGTCGACAAGTTATTTTAGTTAGCATAAAGCAACAAGATAAG CTCAGTGCTGAATTAGAAAAATTAATTAAACAAGCAGATAACAAAACTCGACTAGAAGATTTATATTTACCCTATAAACC AAAGCGTCGTACTAAAGGTAAAATAGCCAACGAAGCAGGCATAACTCCCTTAGCGAATAAGCTTTTTAATAACTGGCAAC TATCTCCAACAACTGAGGCGGTCGCTTTTATTAATGAAACGGCAGGTTTTTCTGATGTGAAAGCTGTGCTAGAAGGTGCG AGCTATATTTTAGCGGAGCGTTTTAGTGAGGATGCTAACCTACTAGCAAAGCTGCGTAGTCATTTGTTAAAACAGGCGCA TTTAGCCAGTAAACTTGTTAAAGGCCAAGAAAGAGCAGGCGCTAAATTTCGTGATTACTTTGAGCATAGTGAAAAGCTGA GAACGGTTCCTTCTCATCGCATGTTAGCGATGTTACGCGGAAGGAATGAAGGTTTTTTACAACTCAATATTGATGTCGAT CCAGGACAAACTATCACAACGTTTAATAGTGCAGAACAACTTATTATTGAGCACTTAACACTTAAATGTTTATCATCAGG TAATAAACAACCCGCTGCGGAATTTTTAACGAAAGTAGTGCAATTAACATGGAAAGCTAAATTAAACATCAGCTTAACAA ATGAATTGATCACGAGTTTACGCGAGCAGGCAGAAACACAAGCGATAGACGTATTTTCAAATAACCTATCCGATGTATTA ATGGCAGCACCAGCAGGGCCTCAAGTAACATTAGGCTTAGATCCTGGCTTAAGAACAGGTTGTAAAATTGCCATTGTCGA TGGCACAGGAAAACTATTACATACTGCTACTATATTCCCACATGTCCCACAAAATCATTGGGATAAGTCACTTCGTACAT TGGTGAATATTTGCCGACAACATAAAGTTGAGTTAGTGGCCATTGGCAATGGTACCGGCTCGCGAGAAAGTGACAAATTA GTTGCTGAGGTGATCCAACTCTTTAAAGCGGATGAAAGCAAAGTGCAACTCACTAAGATGGTCGTTAGTGAGGCTGGTGC TTCTGTTTATTCCGCTTCTGAATTTGCCGCGAACGAGTTTCCTGATTTAGATGTGTCATTACGTGGTGCTGTCTCTATTG CTCGTCGTTTACAAGACCCCTTGGCTGAGTTAGTAAAAATTGATCCTAAAGCGATAGGTGTTGGCCAGTATCAACATGAT GTCAGCCAAAGTCAGCTCAGTAAAACCCTTGATGATGTCGTTGAAGATTGTGTAAATGCGGTTGGTGTTGACTTAAACAG TGCTTCAGCGGCGTTATTAACGCGCGTTTCGGGATTAAACAAAACAATGGCTGGTAATATTGTTGCTTTTCGCGATAGCC AAGGTCGTTTTACCAATAGAAAACAGTTGAAAAAGGTAGCACGTTTAGGACCAAAAGCTTTTGAGCAAGCCGCTGGTTTC TTACGTATTACTAACGGTGATAATCCGTTAGATCAGTCAGCACTTCATCCTGAAAGTTATCCAGTGGTTGAGAAAATCCT CAGTCAATTACAACTTGATGTAAGTAAAGTACTTAATAATAACGAGCAATTACAATCTCTCGATATCACTCAGTTTACCG ATAATGATATAGGTGAAATAACCATTAAAGACATCATTAAAGAGTTAGCTAAACCAAGTAGAGACCCTAGACCGGCATTT AAAACCGCTAGTTTTGCAGAAGGGGTAAATACCATGGCAGATTTAACCCCAGGTATGATACTTGAAGGGGTGGTCTCTAA CGTAGCTAATTTTGGCGCCTTTGTTGATATTGGGGTACATCAAGATGGATTAGTACACATTTCATCAATTACAGAAAAGT TCATCAGTGATCCGCGTGAAATTGTGAAAGCTGGTGAGGTTGTTAAAGTGAAAGTGGTTGAAGTAGATATAGCTCGAAAA CGAATTAGCTTAACTATGCGTTTGGAAGAGCAGGTTAGCGCACAAACTAGCAAACCTGCTTCAGCTAAAAGTGACGGGAA ACACGATAGCAATAAAGCAAAGAATCACGAAAACAGTAGTAATAATAAAGGTAAACCAGCCGTAAAGCACAACAAATCAA AAAGTAAGAAAGTAGACAATGCCGCTATGGGTAACGCTTTCGCCGATGCTTTTGCTAAGCTGAAGAAATAA Protein sequence : MLTIAEQIAQELNVNAVQINAAITLLDDGATVPFIARYRKEATQGLDDNHLRHLAQRLSYLRELEDRRQVILVSIKQQDK LSAELEKLIKQADNKTRLEDLYLPYKPKRRTKGKIANEAGITPLANKLFNNWQLSPTTEAVAFINETAGFSDVKAVLEGA SYILAERFSEDANLLAKLRSHLLKQAHLASKLVKGQERAGAKFRDYFEHSEKLRTVPSHRMLAMLRGRNEGFLQLNIDVD PGQTITTFNSAEQLIIEHLTLKCLSSGNKQPAAEFLTKVVQLTWKAKLNISLTNELITSLREQAETQAIDVFSNNLSDVL MAAPAGPQVTLGLDPGLRTGCKIAIVDGTGKLLHTATIFPHVPQNHWDKSLRTLVNICRQHKVELVAIGNGTGSRESDKL VAEVIQLFKADESKVQLTKMVVSEAGASVYSASEFAANEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKAIGVGQYQHD VSQSQLSKTLDDVVEDCVNAVGVDLNSASAALLTRVSGLNKTMAGNIVAFRDSQGRFTNRKQLKKVARLGPKAFEQAAGF LRITNGDNPLDQSALHPESYPVVEKILSQLQLDVSKVLNNNEQLQSLDITQFTDNDIGEITIKDIIKELAKPSRDPRPAF KTASFAEGVNTMADLTPGMILEGVVSNVANFGAFVDIGVHQDGLVHISSITEKFISDPREIVKAGEVVKVKVVEVDIARK RISLTMRLEEQVSAQTSKPASAKSDGKHDSNKAKNHENSSNNKGKPAVKHNKSKSKKVDNAAMGNAFADAFAKLKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 57 |
