Gene Information

Name : nusG (CPS_4777)
Accession : YP_271421.1
Strain : Colwellia psychrerythraea 34H
Genome accession: NC_003910
Putative virulence/resistance : Unknown
Product : transcription termination/antitermination factor NusG
Function : -
COG functional category : K : Transcription
COG ID : COG0250
EC number : -
Position : 5063005 - 5063592 bp
Length : 588 bp
Strand : -
Note : identified by similarity to SP:P16921; match to protein family HMM PF00467; match to protein family HMM PF02357; match to protein family HMM TIGR00922

DNA sequence :
ATGTCAGAAGAAAATATCTCTCCTGAAGGCGAAGAAAAGAAAGTTAATCAAAATCCGAAATTGCGTTGGTACGTAGTACA
AGCATTTTCTGGTTATGAAGGTCGCGTTCAAAAAACATTGCTTGAGCACATTGAAATCCACGGTTTACAAGAGAAATTCG
GTGAGATTTTAGTTCCTACTGAAGAAGTAGTAGAAATGCGCGCAGGTCAAAAGCGTAAAAGCTCACGTAAGTTTTTCCCT
GGATACGTTTTAGTACAAATGGAAATGGATGTTGATGCTTGGCATTTAGTGAAAAGTGTTCCACGTGTTCTTGGCTTTAT
TGGTGGTACAAGTGATCGTCCTGCACCGATTACCAAGAAAGAAGCGGATCGTATTTTACAACGTCTTGAAGAAACAGATA
AGCCGAAGCCTAAGACATTGTTTGAACCAGGTGAAGTTATTCGTGTTATTGACGGACCATTCGCTGACTTTAATGGTGTA
GTTGAAGAACTTGATTACGAGAAAAACCGTATCAAAGTATCTGTACTTATCTTTGGTCGTTCAACGCCAGTTGATTTAGA
ATTTGGTCAAGTTGAGAAGGGTAGCTAA

Protein sequence :
MSEENISPEGEEKKVNQNPKLRWYVVQAFSGYEGRVQKTLLEHIEIHGLQEKFGEILVPTEEVVEMRAGQKRKSSRKFFP
GYVLVQMEMDVDAWHLVKSVPRVLGFIGGTSDRPAPITKKEADRILQRLEETDKPKPKTLFEPGEVIRVIDGPFADFNGV
VEELDYEKNRIKVSVLIFGRSTPVDLEFGQVEKGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00341 YP_008207806.1 Transcription antiterminator Not tested AbaR25 Protein 2e-55 60
BJAB0868_00345 YP_008211671.1 Transcription antiterminator Not tested AbaR26 Protein 2e-55 60