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Name : gspE (CPS_4590) Accession : YP_271237.1 Strain : Colwellia psychrerythraea 34H Genome accession: NC_003910 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 4842881 - 4844410 bp Length : 1530 bp Strand : - Note : identified by similarity to SP:P37093; match to protein family HMM PF00437; match to protein family HMM TIGR02533 DNA sequence : ATGTCTGATGAAGTTGAAGTCACTGCGCTTGATGAGGCAGAACAAGCACAAGTGAACAGTACTTGGTTATTGCCGTTTGC CTTTGCTAAGCGCCACAGTGTACTCATCTCAACCGATGAACAAACTGGTGGTTATATTTTGCACTGTTTGGCTGATGTTA ACTTTGATATTGTTTTAGAAGTTCGTCGCATACTCAAAGCGTCTTTTGAATTTGATTTTTTACAACTGCCCGCTTTCGAA TTATTGCTAACGCAAGCTTATCAAAGAGACTCTTCTGAAGCACAGCAAATGATGGAAGATATTGGCAATGAAGTTGATTT ATATTCACTTGCCGATGAACTCATTGAAAGTGAAGATTTACTTGAAAATGAAGACGATGCGCCAATTATCAAACTGATCA ATGCCATGCTCAGCGAAGCAATAAAAGAAAGAGCGTCAGATATCCATATCGAAACTTTTGAAAATACCTTACAGATACGT TTTCGTGTTGATGGTGTTTTGCGAGAAGTGCTTAAACCCAATCGTAAATTGGCGTCGTTACTGGTTTCACGCATTAAAGT GATGGCAAAGCTCGACATAGCCGAAAAACGTATTCCACAAGATGGCCGCATTTCGTTGCGTATAGGGGGACGTGCTGTTG ATGTGCGCGTTTCAACTATGCCAACAGGTCATGGTGAGCGAGTGGTATTACGTTTATTAGATAAAAATGCGGCCCGTTTA GATTTGAAACACTTAGGTATGACTGACACTAACCGAGTCAATTTTTCAGCACTTATCGAAAAGCCTCATGGCATTATCTT AGTAACAGGTCCAACAGGCTCAGGTAAAAGTACCACGCTTTATGCTGGATTGACCCAGATAGATGAGAAAGAGCGTAATA TTTTAACCTGCGAAGATCCTATTGAGTATGCTATTGAAGGTATAGGACAAACTCAAGTAAATACCAAAGTGGACATGACA TTTGCTCGCGGTTTACGTGCCATTTTACGTCAGGATCCTGATGTGGTGATGGTAGGTGAAATTCGAGATTTAGAAACCGC GCAAATTGCGGTACAGGCAAGTTTGACTGGTCACTTGGTATTATCTACTTTGCATACTAATACTGCGGCTGGTGCTATAA CCCGCATGGAAGATATGGGCGTAGAACCTTTCCTACTGTCATCGAGTTTATTGGGCGTATTGGCTCAACGTCTTGTACGT ACCCTCTGCCCACATTGTCGTGCAAGTCATCTGCCTGATGACGAAGAAAGGCAATTATTAGCATTGCCAGATGATAATGA TTCAGTGATTTATCGTGCTGTTGGTTGTGCGGAATGCAGTTTTAAAGGCTATCGAGGTCGAGTGGGTATTCATGAATTGT TACCTGTGGATGAAAAAGTACGCGAACTTATTCATAATGGTCAAGGTGAGCAGGCTATTGAAAAATATGTACGATATTCC AGTGCCAGTATTCGTCGGGATGGCTTTGATAAAGTTATGCTTGGACAAACCACTTTAGAGGAGGTCTTACGGGTTACTCG TGAAGATTAA Protein sequence : MSDEVEVTALDEAEQAQVNSTWLLPFAFAKRHSVLISTDEQTGGYILHCLADVNFDIVLEVRRILKASFEFDFLQLPAFE LLLTQAYQRDSSEAQQMMEDIGNEVDLYSLADELIESEDLLENEDDAPIIKLINAMLSEAIKERASDIHIETFENTLQIR FRVDGVLREVLKPNRKLASLLVSRIKVMAKLDIAEKRIPQDGRISLRIGGRAVDVRVSTMPTGHGERVVLRLLDKNAARL DLKHLGMTDTNRVNFSALIEKPHGIILVTGPTGSGKSTTLYAGLTQIDEKERNILTCEDPIEYAIEGIGQTQVNTKVDMT FARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHLVLSTLHTNTAAGAITRMEDMGVEPFLLSSSLLGVLAQRLVR TLCPHCRASHLPDDEERQLLALPDDNDSVIYRAVGCAECSFKGYRGRVGIHELLPVDEKVRELIHNGQGEQAIEKYVRYS SASIRRDGFDKVMLGQTTLEEVLRVTRED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 5e-151 | 65 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-151 | 65 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_271237.1 | general secretion pathway protein E | VFG2048 | Protein | 1e-150 | 64 |
| gspE | YP_271237.1 | general secretion pathway protein E | VFG0182 | Protein | 1e-144 | 64 |
| gspE | YP_271237.1 | general secretion pathway protein E | VFG1876 | Protein | 4e-135 | 57 |
| gspE | YP_271237.1 | general secretion pathway protein E | VFG2426 | Protein | 5e-75 | 47 |
| gspE | YP_271237.1 | general secretion pathway protein E | VFG0112 | Protein | 3e-84 | 45 |
