Gene Information

Name : gspG (CPS_4588)
Accession : YP_271235.1
Strain : Colwellia psychrerythraea 34H
Genome accession: NC_003910
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 4841091 - 4841522 bp
Length : 432 bp
Strand : -
Note : identified by similarity to GP:4139240; match to protein family HMM PF07963; match to protein family HMM TIGR01710; match to protein family HMM TIGR02532

DNA sequence : 
ATGAACATGAAAAAAGTACAAGGTTTCACCTTACTCGAAGTGATGGTGGTCATTGTTATTTTAGGTATTTTAGCCAGTAT
GGTTGTGCCTAATTTAATGGGTAGCCAAGAGCGCGCTAATATGCAAAAAGCCATTTCAGATGTCACCGCATTAGAAACGT
CTTTGAGTTTATATAAAATGGATAATTACGATTACCCTTCGACAGAGCAAGGTTTGGAAGCGTTAGTTGACCAAACGGAT
ATTGAACCAGAGCCACGTCGTTTTCCTGAAGATGGTTACATCAAACGTTTACCAAAAGATCCTTGGGGCAATGAGTATGT
TTTATTGAATCCAGGCGAGCAGGGTAAAATGGATGTCTTTTCAGTAGGTCCAGATGGTGAAGCCGGAACCGAAGATGATA
TAGGTAATTGGAATCTAGGCGATTTCCAGTAA

Protein sequence : 
MNMKKVQGFTLLEVMVVIVILGILASMVVPNLMGSQERANMQKAISDVTALETSLSLYKMDNYDYPSTEQGLEALVDQTD
IEPEPRRFPEDGYIKRLPKDPWGNEYVLLNPGEQGKMDVFSVGPDGEAGTEDDIGNWNLGDFQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 1e-39 61
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 1e-39 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspG YP_271235.1 general secretion pathway protein G VFG2050 Protein 4e-40 62
gspG YP_271235.1 general secretion pathway protein G VFG1871 Protein 2e-31 50
gspG YP_271235.1 general secretion pathway protein G VFG0180 Protein 1e-33 49