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Name : CPS_4538 (CPS_4538) Accession : YP_271186.1 Strain : Colwellia psychrerythraea 34H Genome accession: NC_003910 Putative virulence/resistance : Virulence Product : KpsF/GutQ family protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : - Position : 4790956 - 4791921 bp Length : 966 bp Strand : + Note : identified by match to protein family HMM PF00571; match to protein family HMM PF01380; match to protein family HMM TIGR00393 DNA sequence : ATGAAAAATTTCAAAGAATTAGCAAAAAACGTTATTGAGATTGAACAGCAAGCTATCGCTGAACTAGTACAGTTTATTGA TGATAACTTTGAACTTGCCTGTCAACTCATGTTTCATTGCAAAGGACGAGTAATCGTCATTGGCATGGGGAAATCAGGTC ATATTGGTGGTAAAATAGCGGCTACGCTTGCTAGTACTGGCACACCATCATTTTTTGTTCACCCTGGAGAAGCTAGTCAT GGCGATCTAGGCATGGTCACCAGCAATGATGTGGTTTTAACCATTTCTAATTCGGGTGAAACTAGTGAAGTACTTGCTAT AATTCCGGTTATAAAGCGCATCGGTGCTAAATTAATTTCAATGACTGGCAACACTGAATCTACCTTAGCTAAATTAGCCG ATACCCATGTTTGCATTAAAGTATCGGCTGAAGCTTGTCCTCTTGGTTTAACGCCAACATCAAGTACCACGGCAACCCTA GTAATGGGTGATGCATTAGCCGTTGCTTTACTCAACGCGCGTGATTTTACCGCAGAGGATTTCGCTTTATCTCACCCTGG TGGCAGTTTAGGCAAACGTCTATTACTGCGCCTAAGCGACATTATGCATAAAGACGATCGCGTACCTATGATTTCGGAAA ATGCTCTTATCAAAGACGCCTTAGTTGAAATGTCCTTAAAAGGCCTGGGCATGACTGCTATAGTTAATGAACAACAACAA CTAGTCGGTTTATTTACTGATGGTGATCTTCGCAGGGTATTAGACAATAGGATAGATATCCACAGTGAAAGTATTAACAC AGTAATGACCCATAACCCTAGTGTAGCGCAGAGTGATATGCTTGCCGCACAGGCGCTAAAAATAATGGAAGATAAAAAAA TAAACGGCCTTATCATTGTCGATAGCAACAATATACCTGTAGGTGCAATGAATATGCATGACTTCTTAAGTTCCGGAGTA CTTTAA Protein sequence : MKNFKELAKNVIEIEQQAIAELVQFIDDNFELACQLMFHCKGRVIVIGMGKSGHIGGKIAATLASTGTPSFFVHPGEASH GDLGMVTSNDVVLTISNSGETSEVLAIIPVIKRIGAKLISMTGNTESTLAKLADTHVCIKVSAEACPLGLTPTSSTTATL VMGDALAVALLNARDFTAEDFALSHPGGSLGKRLLLRLSDIMHKDDRVPMISENALIKDALVEMSLKGLGMTAIVNEQQQ LVGLFTDGDLRRVLDNRIDIHSESINTVMTHNPSVAQSDMLAAQALKIMEDKKINGLIIVDSNNIPVGAMNMHDFLSSGV L |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 5e-46 | 45 |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 3e-46 | 43 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 3e-46 | 43 |
