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Name : murD (CPS_4467) Accession : YP_271115.1 Strain : Colwellia psychrerythraea 34H Genome accession: NC_003910 Putative virulence/resistance : Unknown Product : UDP-N-acetylmuramoylalanine--D-glutamate ligase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0771 EC number : 6.3.2.9 Position : 4704643 - 4706058 bp Length : 1416 bp Strand : - Note : identified by match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM TIGR01087 DNA sequence : ATGACTTGGTTAACAGCGTTTAAAGATAAAAATATTGTCGTGCTAGGAGCTGGAATGACAGGTTTGTCATGCCTACGTTT TTTGCACGCACAAGATTTGTCATTTGCTGTTAATGATTCACGACCTATGCCTTTTGCAAATAGGGATGAACAAACTCAAT ACGAGAATGATTATCCAAAGGCAAAATTTGTTTTCGGTCAATGGCAACAAAGTTTAATTTCTAGTGCTGATATAATTATT ACCAGTCCAGGTATTGATTTAGTCAGTGAAGGAATTACAGCACTTATCCCAGAAAACTGTCTGGTTATAGGTGACGTTGA ATTATTTTGCCTAGTTAACAATAGCCGCATCTCCCCGATGAAAATGTTGGCAGTCACTGGCTCAAATGGCAAGTCTACCG TAGTGTCACTGTTAGCTTCTCTAGCAAAAGCTATCGGAGTTAATGCTGCATTGGCAGGTAACATCGGAGAGCCAATACTT AATCTACTTCATCGAGAAAATGTCTATAACTCTCAGCTTGCTAATCAACCAGACATTGTCATTGTCGAGCTTTCGAGTTT CCAACTAGAAACGTTATCCAGTATGCATGCTATTGCTGCGAGTGTGCTTAATTTAAGTGATGATCACCTTGACCGGCATA AGACCTTAGCGAATTACCAGGCTATTAAACAAAGTATTTATCCACAAGCAAAAATTGCCGTGGTGAGTCGAGAAGATCAA GCATCAAATACTTTAGTTGCCGCTCAAGAAATAATTTCTTTTGGTTTAAATAAACCAGAGCAAGACTGTTTTGGTCTGCA AGCTATTGATAATAAAATGGTAATGATGTTTGGTGAACAAGCTTTAATTTCAATTGATGAATTACCTCTTGCCGGTATGC ATAATGCGCTCAATTATATGGCAGCTTTAGCACTTGGTTATAGCGCTGGTTGGTCATTATCAGCTATGACAGAAAACCTT GCCGGATTTATGGGTTTAGCTCACCGTTGCCAGCGCGTAGCGAGTGAAGATTACATTCAATGGATTAATGATTCTAAGGC GACAAATGTTGGTGCAACACTCGCCGCTATTACTGGTTTAGTCCCGACGCTTACAGGCCAAAATAAGTTAATTCTTATTG CTGGCGGTGATGGCAAAGGTGCTGATTTTTCAGCGCTAACAACAATATTAAATTGTGATGTAAATCAGCTGATTACTTTA GGTAAGGACGGCGCTGAGATTGCTAGTTTAGTGAGTGATGCTATTCAAGTGGATACCCTCAGGGAAGCAGTAGAGCAAGC TAAGCAGATAGCCAAACCAGGTGACATGGTCTTACTTTCACCAGCGTGCGCCAGTATTGATATGTTCAAAAATTATCAAG TACGCGGCGAGCAATTCATTGCAGCAGTACAAGCTAAGGAGGACTCATGTCGTTAG Protein sequence : MTWLTAFKDKNIVVLGAGMTGLSCLRFLHAQDLSFAVNDSRPMPFANRDEQTQYENDYPKAKFVFGQWQQSLISSADIII TSPGIDLVSEGITALIPENCLVIGDVELFCLVNNSRISPMKMLAVTGSNGKSTVVSLLASLAKAIGVNAALAGNIGEPIL NLLHRENVYNSQLANQPDIVIVELSSFQLETLSSMHAIAASVLNLSDDHLDRHKTLANYQAIKQSIYPQAKIAVVSREDQ ASNTLVAAQEIISFGLNKPEQDCFGLQAIDNKMVMMFGEQALISIDELPLAGMHNALNYMAALALGYSAGWSLSAMTENL AGFMGLAHRCQRVASEDYIQWINDSKATNVGATLAAITGLVPTLTGQNKLILIAGGDGKGADFSALTTILNCDVNQLITL GKDGAEIASLVSDAIQVDTLREAVEQAKQIAKPGDMVLLSPACASIDMFKNYQVRGEQFIAAVQAKEDSCR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00311 | YP_008207776.1 | UDP-N-acetylmuramoylalanine-D-glutamate ligase | Not tested | AbaR25 | Protein | 3e-65 | 41 |
| BJAB0868_00315 | YP_008211641.1 | UDP-N-acetylmuramoylalanine-D-glutamate ligase | Not tested | AbaR26 | Protein | 3e-65 | 41 |
