|
Name : mutS (CPS_4137) Accession : YP_270792.1 Strain : Colwellia psychrerythraea 34H Genome accession: NC_003910 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 4352552 - 4355170 bp Length : 2619 bp Strand : + Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : ATGACCACTGCCACAAAAGATCTTTCATCACACACCCCTATGATGCGCCAGTACTTAACTATTAAGGCTGAATTTCCACA TACTTTGATCTTTTATCGCATGGGTGATTTTTATGAATTATTTTTTGACGATGCCAAAAAAGCTTCTGACTTATTAGATA TATCACTTACCGCTCGGGGTAAAACTGGCGGTAATGCTATTCCAATGGCGGGTGTGCCATATCATGCGGCTGAAAACTAC TTAGCGAAGCTAGTCGCCCTAGGTGAATCGGTCGCTATTTGTGAGCAAATTGGCGATCCTGCCACGAGTAAAGGCCCAGT AGAGCGAAAAGTCGTACGTGTTATTACACCCGGTACTGTTAGTGATGAAGCACTGCTAGTCGACAGGCAAGACAATCTCA TTGTTGCCATCGTCGATAATCAATCCCCAAATGCAAAACTAAAAACAAGCTCAGCACCCGCTTTTGGTCTTGCTTATTTA GATATGGCCAGTGGTCGATTTGTACTCACTGAACCACAAACTGCTGAACAACTCCAAGCTGAACTTCAACGTTTATCTCC TGCAGAATTACTTTATAGTGAATCTCTACAAGACTTTAGTTTAATCGAGCAAAGAAAAGGTTTACGTCGTCGTCCAGAGT GGGAGTTTGATCTTGATACTGCCATTAGTTTATTGAATAAGCAGTTCGATACCAAAGAATTAACTGGTTTTGGTGTTGAT GACAAGCCTTTAGGTCTGGCTGCTGCAGGTTGTTTATTTCAATACGTTAAAGATACTCAACGTACTGCCCTGCCTCATAT TCGCGCCATTGTTTGTGAGTCTGCCAATAAAGGTGTGGTACTTGATGCAGCCACTAGACGAAATTTAGAACTGACCCAAA ACTTACATGGCGGTTTAGATAATACCCTTGCTGCTATTTTAGATAAATCTTCCACACCAATGGGGTCTCGTTTACTTAAA CGCTGGTTACACTTTCCATTACGTGATTTAACGGTTCTTAATAACCGCCAAAATACGGTGAGTGATATCATAGCATTAGA TCTTATCGCGCCTATTCAGCCATTATTAAAAGGCTTGGGTGACATTGAACGTATTGTTTCTAGAATCGCCTTAGGCTCTG CAAGGCCTCGTGATTTTGCTCGTTTACGTCATGCTCTACAACAATTACCAGAGTTACAGAATGAGTTAAAAAGTGGATTA ACAGAATCCCCTACTAACTACTTAGCCACTATTGCTCAGCAAAGCCAGCCAATGCCTCAACTAGAAGGCTTGCTAGTACA TGCCATTGTTGAAAACCCACCCGTACTAATACGTGATGGTGGTGTTATCGCACCAGGTTATAATAACGAGCTTGATGTAC TACGCGATTTAAGTGATGGTGCGACTGAGTTTTTAGCGCAACTTGAACAACGTGAGAAAGAACGTACTGGCATCCACTCA TTGAAAGTAGGTTATAACAGGGTTCATGGCTTTTTTATTGAAATGAGTCGTACCGCCGCCGTTGATGTACCTGATGATTA CATTCGCCGTCAAACATTAAAAAATAATGAACGTTTTATTACCGAAGAATTAAAGCAACATGAAGAGAAAGTACTTAGCG CTCAAAGTAAGTTTTTAGCCCTAGAGAAATCACTCTATCAAGAGTTATTCGATAAAGTATTACCTGATTTAGCGCAACTG CAGCAATTAAGTCAAGCCATTGCTGAGCTCGATGTATTAACTACCTTCGCAGAACGTGCATTAGCGCTAAACTACGTAAA ACCTAGCTTAGTTGAAGAACCAGGCATTAGTATTGATGCTGGTCGTCATGTTGTCGTTGAACAAATGACTAACGATGCCT TTATCGCCAACCCAGTGTTGTTAACAGAACAGCGAAAGATGTTAATTATTACTGGTCCAAATATGGGCGGTAAATCTACC TATATGCGCCAAACGGCCTTAATAGTTTTACTTGCTCATATAGGTTGTTATGTGCCTGCTGACAACGCGACCATAGGTTT AGTTGATAGGATATTTACCCGAATTGGTGCTTCCGATGATTTAGCCAGTGGCCGCTCAACCTTCATGGTCGAAATGACTG AAACGGCAAACATTTTACACAACGCTACGGATAAAAGTTTAGTGCTGCTTGATGAGATTGGCCGTGGAACTAGTACTTAC GATGGCTTATCACTCGCTTGGGCTTGTGCTGAAATGTTAGCACTTAAAACCAAAGCTTTTACTTTATTCGCGACCCATTA TTTTGAGCTGACTTTACTTGCCGGTCAAATTTCAACCTTAGCCAATGTGCACTTAGATGCCATGGAGCATGACGATAACA TCGTCTTTATGCATGCAGTACAAGAAGGAGCGGCTAGCAAAAGTTTTGGTTTGCAGGTAGCACAGTTAGCAGGTGTACCA AAAACAGTGATCAAGCGTGCTAAACAAAGGTTAAGTGAATTAGAGCAACAGCAAACGCCAAGCATACTACCAGCACCTAT ACAAAATGATGCCTTTGAACAGCTCAGTTTCGCCCCTGAAGAGCATTCAGTGGTAACAACACTTATTGATACCGATATTA ATGAGCTAAGCCCGAGACAGGCACTAGACTTATTATTTAGCTTAAAAGAACAACTCTAA Protein sequence : MTTATKDLSSHTPMMRQYLTIKAEFPHTLIFYRMGDFYELFFDDAKKASDLLDISLTARGKTGGNAIPMAGVPYHAAENY LAKLVALGESVAICEQIGDPATSKGPVERKVVRVITPGTVSDEALLVDRQDNLIVAIVDNQSPNAKLKTSSAPAFGLAYL DMASGRFVLTEPQTAEQLQAELQRLSPAELLYSESLQDFSLIEQRKGLRRRPEWEFDLDTAISLLNKQFDTKELTGFGVD DKPLGLAAAGCLFQYVKDTQRTALPHIRAIVCESANKGVVLDAATRRNLELTQNLHGGLDNTLAAILDKSSTPMGSRLLK RWLHFPLRDLTVLNNRQNTVSDIIALDLIAPIQPLLKGLGDIERIVSRIALGSARPRDFARLRHALQQLPELQNELKSGL TESPTNYLATIAQQSQPMPQLEGLLVHAIVENPPVLIRDGGVIAPGYNNELDVLRDLSDGATEFLAQLEQREKERTGIHS LKVGYNRVHGFFIEMSRTAAVDVPDDYIRRQTLKNNERFITEELKQHEEKVLSAQSKFLALEKSLYQELFDKVLPDLAQL QQLSQAIAELDVLTTFAERALALNYVKPSLVEEPGISIDAGRHVVVEQMTNDAFIANPVLLTEQRKMLIITGPNMGGKST YMRQTALIVLLAHIGCYVPADNATIGLVDRIFTRIGASDDLASGRSTFMVEMTETANILHNATDKSLVLLDEIGRGTSTY DGLSLAWACAEMLALKTKAFTLFATHYFELTLLAGQISTLANVHLDAMEHDDNIVFMHAVQEGAASKSFGLQVAQLAGVP KTVIKRAKQRLSELEQQQTPSILPAPIQNDAFEQLSFAPEEHSVVTTLIDTDINELSPRQALDLLFSLKEQL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 0.0 | 59 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| mutS | YP_270792.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 62 |
