Gene Information

Name : CPS_3828 (CPS_3828)
Accession : YP_270491.1
Strain : Colwellia psychrerythraea 34H
Genome accession: NC_003910
Putative virulence/resistance : Unknown
Product : aromatic rich family protein
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG2867
EC number : -
Position : 3995158 - 3995598 bp
Length : 441 bp
Strand : -
Note : identified by match to protein family HMM PF03364

DNA sequence :
ATGCCAACCATAAGTCGTAGTGCTTTAGTTATGTACAGTGTTGATCAGATGTACCAGTTAATAAACGATATCCCAGCCTA
TCCTAAGTTCTTACCAGATTGTAATGACAGTAAGGTTATAGACCAAGATGAGCAGTCAGTAACAGCAGCGTTACTTGTCT
CTAAAGGTGGGTTAAGTAAGTGGTTCACAACTAAAAACACCTTGATATCTAATGAAAAAATTCATTTGTCACTTGTTGAT
GGCCCTTTTAAAAAACTTGAAGGTTATTGGTTACTCACGCCTTTATCAGATGAAGCTTGTAAGGTTAGTTTAGAGTTAGA
GTATGAGTTTTCTAATAAACTTGTTTCTTTGGCTTTTGGTAAAGTATTTGGCCATTTTAGTAATAGCTTAGTGCAAGTTT
TTACCCAGCGAGCAAAAGAAATTTACGGAGTTAATGTGTAA

Protein sequence :
MPTISRSALVMYSVDQMYQLINDIPAYPKFLPDCNDSKVIDQDEQSVTAALLVSKGGLSKWFTTKNTLISNEKIHLSLVD
GPFKKLEGYWLLTPLSDEACKVSLELEYEFSNKLVSLAFGKVFGHFSNSLVQVFTQRAKEIYGVNV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAA82716.1 - Not tested VPI Protein 4e-38 53