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Name : CPS_3644 (CPS_3644) Accession : YP_270312.1 Strain : Colwellia psychrerythraea 34H Genome accession: NC_003910 Putative virulence/resistance : Virulence Product : UDP-glucose/GDP-mannose dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 3787271 - 3788551 bp Length : 1281 bp Strand : - Note : identified by similarity to SP:P39861; match to protein family HMM PF00984; match to protein family HMM PF03720; match to protein family HMM PF03721 DNA sequence : ATGTTGCACTCATTAAAAAACGTGAAGCTAGGCATTATAGGTTTAGGTTATGTTGGTTTACCTCTCGCAGTAGAGTTTGG TAAAAAATACCCTACTTTGGGGTTTGATATCAACACCAAACGTGTTGGCGAATTAAAGCAAGGACATGACTTTACTTTAG AAGTATCGAGTGAAGAATTAGCTGATTCTGAATTTATTTCATATTCTGCTGACGTTGACGATTTAAAAAATTGTAATATC TATATTGTTACCGTGCCGACGCCTATCGACAAACATAAACAACCTGATTTAACCCCATTAGTAAAGGCGAGTGCTATGCT TGCTAAAGTGATTAATAAAGGTGATATCGTCATTTATGAATCTACGGTATATCCGGGAGCAACCGAAGAAGTTTGTTTAC CGGAAGTTGAGCGTCACTCTGGTTTAGTGTTTAACCAAGATTTTTATGCCGGTTATAGCCCTGAACGCATTAACCCGGGT GATAAAGAACATCGAGTAACGAATATCCTTAAGGTAACTTCGGGCTCAACGCCAGAGATTAGCGACTTTATTGACAGTTT ATATAAATCAATTATTACAGCAGGTACCTATCAAGCATCAAGTATTCAAGTGGCTGAAGCGGCAAAAGTCATTGAAAATA CTCAGCGAGATCTAAATATTGCTTTGATCAATGAGCTTGCCGTCATTTTTAATAAATTGAATATTGATACTGAAGAAGTA TTAAAAGCAGCCGGTACTAAATGGAACTTCTTACCATTTAGACCTGGTCTTGTCGGCGGTCACTGCATTGGTGTTGATCC TTATTATTTGACTCATAAAGCACAATCTATAGGTTACAATCCCGAGGTCATACTTGCTGGTCGTCGCATTAATGACTCTA TGGGCGAATATGTGGTTTCACAGTTAGTGAAAACTATGCTTAAAAGGAAGTTACCAGTTAATGGCGCTAATGTTCTCGTT ATGGGTTTGACCTTTAAAGAGAACTGCCCTGATGTGCGAAATACCAAAGTTGTTGATATTTTGTCTGAGTTAGCTGAATT TGATATTAATGTTGATGTATACGATCCTTGGGTTAATCCTAAAGACGCAAAACATGAATATGATGTTGACTTAATATCAG CACCTAAGCATAGCTTCTATGACGCGGTTATTTTTGCAGTAGCTCATGATCAATTTAAAGCATTATCCGCAGATGATATT AAGTTATTGATGAAAAAAGATCATGTGATTTATGATTTGAAATATATGCTAGACAAAGAATTAGCTGATATTCGCTTATA A Protein sequence : MLHSLKNVKLGIIGLGYVGLPLAVEFGKKYPTLGFDINTKRVGELKQGHDFTLEVSSEELADSEFISYSADVDDLKNCNI YIVTVPTPIDKHKQPDLTPLVKASAMLAKVINKGDIVIYESTVYPGATEEVCLPEVERHSGLVFNQDFYAGYSPERINPG DKEHRVTNILKVTSGSTPEISDFIDSLYKSIITAGTYQASSIQVAEAAKVIENTQRDLNIALINELAVIFNKLNIDTEEV LKAAGTKWNFLPFRPGLVGGHCIGVDPYYLTHKAQSIGYNPEVILAGRRINDSMGEYVVSQLVKTMLKRKLPVNGANVLV MGLTFKENCPDVRNTKVVDILSELAEFDINVDVYDPWVNPKDAKHEYDVDLISAPKHSFYDAVIFAVAHDQFKALSADDI KLLMKKDHVIYDLKYMLDKELADIRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 8e-139 | 62 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 8e-139 | 62 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 3e-111 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CPS_3644 | YP_270312.1 | UDP-glucose/GDP-mannose dehydrogenase | VFG0431 | Protein | 4e-139 | 62 |
