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Name : CPS_3643 (CPS_3643) Accession : YP_270311.1 Strain : Colwellia psychrerythraea 34H Genome accession: NC_003910 Putative virulence/resistance : Virulence Product : NAD-dependent epimerase/dehydratase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : - Position : 3786141 - 3787175 bp Length : 1035 bp Strand : - Note : identified by similarity to SP:Q57664; match to protein family HMM PF01370; match to protein family HMM PF07993 DNA sequence : ATGACTCAATTTAAAAAAATTAAACAAGAACTACTCAATTCACCAAAGACTTGGCTTATCACAGGTTGTGCTGGTTTTAT TGGTTCGAATCTTTTAGAAACATTACTTTTATTAAATCAGAAAGTTGTCGGTTTAGATAACTTCGCTACGGGTCATCAGC ACAACTTTGATGAAGTTCAAACACAGGTTTCGGCTGAGCAATGGCAAAATTTTTATTTTGTTAAAGGTGATATTCGCCAA TTGGAAGACTGTCAAACCGCGTTAAGCCATTACAAAAGTGGTGTTGATTATATCCTTCATCAAGCAGCGTTAGGCTCAGT ACCTAGATCAATTGCTGATCCCCTATTAACTAACTCAGCAAATATTACCGGTTTTTTGACTATGTTAACGGCAGCGAAAG AAACTCAAGTTAAAAGCTTCGTTTACGCTGCATCAAGTTCTACTTATGGAGATCACCCAGCATTACCTAAAGTTGAAGAT GCTATCGGTAAACCGCTATCTCCTTATGCAGTAACTAAATATGTAAATGAGCTTTATGCCGATGTGTTTCATAAAACCTA TGGTTTGAATTGCACTGGCTTACGCTACTTTAATGTTTTTGGTAAAAGACAAGACCCTGACGGCGCTTATGCTGCGGTAA TCCCTAAGTGGACAGTTGCAATGATCGCTAATGAAGAATTACTTATAAATGGTGATGGTGAAACGAGTCGCGATTTCTGT TTTGTTGAAAATGCCGTACAAGCTAATATTTTAGCTGCAACGGCCAATGATGCAGGTAAAAACCAAGTGTATAATGTTGC CCTCGGTGATAGAACGAGTTTAAATACCTTATTTAATAGCTTGAAAGTTGCCTTACAAGCAAATGGTGTTGATTATCAAA AGTCGCCAACGTATCAAGATTTTAGAGCAGGTGATGTTAGACATTCACAGGCTGATATTTCTAAAGCAAAATCTTTGATT GGCTTTGAGCCTGAGTTTAAAATTCAACAAGGTATAGACAAAGCGATGCCTTGGTATATTAAATTCTTGAATTAA Protein sequence : MTQFKKIKQELLNSPKTWLITGCAGFIGSNLLETLLLLNQKVVGLDNFATGHQHNFDEVQTQVSAEQWQNFYFVKGDIRQ LEDCQTALSHYKSGVDYILHQAALGSVPRSIADPLLTNSANITGFLTMLTAAKETQVKSFVYAASSSTYGDHPALPKVED AIGKPLSPYAVTKYVNELYADVFHKTYGLNCTGLRYFNVFGKRQDPDGAYAAVIPKWTVAMIANEELLINGDGETSRDFC FVENAVQANILAATANDAGKNQVYNVALGDRTSLNTLFNSLKVALQANGVDYQKSPTYQDFRAGDVRHSQADISKAKSLI GFEPEFKIQQGIDKAMPWYIKFLN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviC | NP_458739.1 | Vi polysaccharide biosynthesis protein, epimerase | Virulence | SPI-7 | Protein | 4e-99 | 62 |
| tviC | NP_807944.1 | VI polysaccharide biosynthesis epimerase | Virulence | SPI-7 | Protein | 4e-99 | 62 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CPS_3643 | YP_270311.1 | NAD-dependent epimerase/dehydratase | VFG0430 | Protein | 1e-99 | 62 |
