Gene Information

Name : pcaI (CPS_3591)
Accession : YP_270259.1
Strain : Colwellia psychrerythraea 34H
Genome accession: NC_003910
Putative virulence/resistance : Unknown
Product : 3-oxoadipate CoA-transferase subunit A
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1788
EC number : 2.8.3.8
Position : 3728097 - 3728927 bp
Length : 831 bp
Strand : +
Note : identified by similarity to GP:4007784; match to protein family HMM PF01144; match to protein family HMM TIGR02429

DNA sequence :
ATGATAGATAAAAGAGTAGCGAGTTGCGCCAGTGCGGTTGCCGATATAAAGGACGGCGATACGGTAATGATTGGTGGTTT
TGGTGAAGCAGGTAGCCCAATAGAGTTAATTCACGCATTAATAGATCATGGTGCAAAGAACTTAACCGTCATTAATAACA
ATACTGGCAGTGGCCGAGTAGGTTTAGCTGCCCTAATTGAAAATGGTCAAGTGGCTAAAATGATCTGCTCCTACCCGCGC
ACGGCTAATTCTTTAGTTTTTCCCGAGTTATATCGCAGTGGAAAAATTGATCTAGAACTTGTTCCTCAAGGAACGTTAGC
CGAACGAATTCGTGCTGGTGGCGCTGGGATCCCTGCTTTTTACACCAAAACATCGGTTGGAACACCACTTGCGGACGGTA
AAGAACTGCGAAATTTTGAAGGCGATGATTATGTTATGGAGCGTAGCCTAAAAGCAGATTTCGCTCTTATCAAAGCCAAG
CAAGCGGATAGATACGGTAATTTAACCTTTAACAAAACTGCCCGTAACTTTGCGCCAATTATGGCCATGGCAGCAACAAA
CACCTTAGTGCAAGTTAATAATATGGTTGAATTGGGTGATCTTGATCCCGAAAACGTCATTACCCCCGGCATATTCGTTA
ATGCGTTAATTGAGGTGACTCAACCTCAACAAGAATCTCAACTAGTGAAAGACGGTATTACTTACCCAGTAACAAAAAGC
CCAGTAACAAAAACCCCAGCAACAAAGAATCCGACGGCAAAGAACACTGCACAAAATAACGTTTCACCAAGTAACCTAGA
AAAGATAAATGTCGGAGAAACACAAGCATGA

Protein sequence :
MIDKRVASCASAVADIKDGDTVMIGGFGEAGSPIELIHALIDHGAKNLTVINNNTGSGRVGLAALIENGQVAKMICSYPR
TANSLVFPELYRSGKIDLELVPQGTLAERIRAGGAGIPAFYTKTSVGTPLADGKELRNFEGDDYVMERSLKADFALIKAK
QADRYGNLTFNKTARNFAPIMAMAATNTLVQVNNMVELGDLDPENVITPGIFVNALIEVTQPQQESQLVKDGITYPVTKS
PVTKTPATKNPTAKNTAQNNVSPSNLEKINVGETQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18070.1 unknown Not tested TTSS locus Protein 4e-35 43