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Name : CPS_3375 (CPS_3375) Accession : YP_270051.1 Strain : Colwellia psychrerythraea 34H Genome accession: NC_003910 Putative virulence/resistance : Unknown Product : ISCps6, transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3666 EC number : - Position : 3507040 - 3508473 bp Length : 1434 bp Strand : - Note : identified by match to protein family HMM PF01609 DNA sequence : ATGTCCCACCATATTAAAGGCCAAGGTCGAAACCAAATAACCCTATTTCCTGAAGCATTGGACGATTTTGTCACCAAAGA AAATCACGTTCGTGTTGTTGATGCCTTTGTTGATGAGCTTGATTTACACGCTTTAGGATTCAACCGTGTTATCGCCAACA ACACAGGCCGTCCAGGTTATCATCCTGCCGCGTTGCTTAAGTTATACATTTATGGGTATTTGAACCGCATCCAGTCCTCC CGTCGTTTAGAAAAAGGATCACATCGTAATGTTGAGTTAATGTGGTTACTCGAGCGTTTACAGCCAGATTTCAAAACGAT TGCAGACTTCAGGAAAGACAATGGTAAGGCTATCACTAAAGTTTGCCGTCACTTCATCGAGTTATGCCGTCAAATGAATA TGTTCACCGATGCCGTCGTGGCTATCGATGGCAGTAAATTCAAAGCGGTTAACAGCAAGCACAACAATTACACGCCGAAC AAAGTTAAAGATCATATTCGTCGTATGGAAACACATATTGAGAATTATTTGAGTCGGCTTGAAACCGCCGATGGCAATGA TAAAGTTGATGCTGTTCAAACCTCTGCGGCTGAGAAAATCGCATGGATGAAACAACGCGTAGCTGAACTCAAGGAACTTG CTGTACAAGTGGAGGCGCATCCAGACAAACAACTTTCCACGGTTGACCCCGATGCTCGCTTACTTAAGACACAAGGCATG AACAGACAGGTTTGTTATAACGTTCAAAGCTCTGTTGATACGAAACATCATTTGATAGTGACGCACGAAGTCACCAATAC CAATGACCGTGGCAAGCTGGCCGATTTGACACGATTAACGCAGCAAGCATTGGCGCAAAAAAACATTACAGTGTTGGCAG ACAAAGGTTACTACAGCGGACGTGATATCAAAGCAACTCAAGATATGGGGGCCTCTGCGCTTGTGCCCAAAGGGGATACG TCAGGTGCTAAAAAGAAGGGGATCTTCAATCGGTCTTTATTCAAATATGACAAAGACCGAGACCTTTACGTCTGTCCTGC GGGGAATGAACTACCACATAAGCGAAATGTTGAAGAAGGCGGAATGAAACTCAAGGTCTATGTTGACCACATTGCTTGCA GAAACTGTGATATTCGCGCTAAATGTACTCAATCAAAACGCGAGCCACGAAAGATAAGGCGTTGGATACACGAAGGTGAA ATGGAAGAAATGCTAACAAGATTGAAAAACGCACCTGACACGGTGCTCATTCGAAAACAAACTGTAGAACATCCTTTTGG CACCATTAAAATGTGGATGGGAGCAACTCACTTCCTTACCAAGCAACTGAAAAATGTCAGTACCGAGATGAGTCTTCATG TGCTCGCTTATAACCTCAAACGAATGATGTCGATTGTGGGCAGTGAAAGTCTAATCGAAGCAATAAGGGCGTAG Protein sequence : MSHHIKGQGRNQITLFPEALDDFVTKENHVRVVDAFVDELDLHALGFNRVIANNTGRPGYHPAALLKLYIYGYLNRIQSS RRLEKGSHRNVELMWLLERLQPDFKTIADFRKDNGKAITKVCRHFIELCRQMNMFTDAVVAIDGSKFKAVNSKHNNYTPN KVKDHIRRMETHIENYLSRLETADGNDKVDAVQTSAAEKIAWMKQRVAELKELAVQVEAHPDKQLSTVDPDARLLKTQGM NRQVCYNVQSSVDTKHHLIVTHEVTNTNDRGKLADLTRLTQQALAQKNITVLADKGYYSGRDIKATQDMGASALVPKGDT SGAKKKGIFNRSLFKYDKDRDLYVCPAGNELPHKRNVEEGGMKLKVYVDHIACRNCDIRAKCTQSKREPRKIRRWIHEGE MEEMLTRLKNAPDTVLIRKQTVEHPFGTIKMWMGATHFLTKQLKNVSTEMSLHVLAYNLKRMMSIVGSESLIEAIRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD91340.1 | hypothetical protein | Not tested | Not named | Protein | 6e-126 | 54 |
| tnpA | ACY75519.1 | transposase | Not tested | Tn6060 | Protein | 6e-126 | 54 |
| tnpA | ACY75536.1 | transposase | Not tested | Tn6060 | Protein | 6e-126 | 54 |
| ORF SG74 | AAN62296.1 | transposase domain protein | Not tested | PAGI-3(SG) | Protein | 5e-126 | 53 |
