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Name : CPS_3248 (CPS_3248) Accession : YP_269938.1 Strain : Colwellia psychrerythraea 34H Genome accession: NC_003910 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis glycosyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG2148 EC number : - Position : 3380001 - 3380681 bp Length : 681 bp Strand : + Note : identified by similarity to SP:Q04664; match to protein family HMM PF02397 DNA sequence : ATGGCTATTCAAATTTTACAACACGTTAAAAATAACGCTGTATTTACTGGTACTCATAAAACCATTGATAAAAATTATAA ACATAAAGGGATCCCAGTTATCTTGCAACAAACGGTTGCATTGATTACGTTACTATTGATAAGCCCATTACTTTTATTAG CGCTCATTTTGATCAAAGTTGAAAGTTCAGGTAGTGCTTTATTCTCTCAAACAAGAGTGGGTGAAAATGGTCGGCATTTC AAAATGTATAAATTCCGTTCTATGTATTTAAAAACAGATCCTAATTATAAAGAGCCGGATCCAACACAAAGCTCTCGTGA AGGGGTGTGTAAAAAGTATATTAATGACCCTAGAATTACCAAGATTGGCCAATTTATCAGAAAATATTCGATAGATGAGA TCCCACAGTTATTTAATATTGTTAGAGGGGATATGTGTTTGGTTGGACCTAGACCTGCATTATCTATTGAAACTTATGAG TATGATAATAACGATCAAACAAGATTGTTTACCAAACCTGGTCTAACGGGGTTATGGCAAGTATCTGGCCGCGCAGATAC TAATTTTGAAGAGCAGTTACAGTTAGACAAAACGTATATTAAACAGCAGAGTTTTTTAATGGATTGTAAAATAATAGCGC TCACCATTCCTGCAGTATTAAGTGCAAAAGGTGCTTATTAA Protein sequence : MAIQILQHVKNNAVFTGTHKTIDKNYKHKGIPVILQQTVALITLLLISPLLLLALILIKVESSGSALFSQTRVGENGRHF KMYKFRSMYLKTDPNYKEPDPTQSSREGVCKKYINDPRITKIGQFIRKYSIDEIPQLFNIVRGDMCLVGPRPALSIETYE YDNNDQTRLFTKPGLTGLWQVSGRADTNFEEQLQLDKTYIKQQSFLMDCKIIALTIPAVLSAKGAY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0070 | YP_300160.1 | capsular polysaccharide synthesis protein | Not tested | SCC15305cap | Protein | 5e-22 | 43 |
| cap1N | AAL26667.1 | type 8 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-21 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CPS_3248 | YP_269938.1 | polysaccharide biosynthesis glycosyltransferase | VFG1369 | Protein | 2e-18 | 41 |
