Gene Information

Name : CPS_3122 (CPS_3122)
Accession : YP_269819.1
Strain : Colwellia psychrerythraea 34H
Genome accession: NC_003910
Putative virulence/resistance : Unknown
Product : ISCps9, transposase orfB
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 3261796 - 3262683 bp
Length : 888 bp
Strand : +
Note : identified by similarity to SP:P05822; match to protein family HMM PF00665

DNA sequence : 
GTGGCAACGGTATCTGGCGGAAGTCCATCAGAGCGATTTGGATTCATCGAAAAACACAAAGAAGCCTTAGGTGTTAAATA
CCTTTGCTCATGGCTTGATGTCTCTCGTAGTGGCTTTTATGCATGGCGACGACGTCCACGTTCAATGCGTGCTATTAATG
ATGCGGATTTACTTTTAAATATCAAACAAGTCTTTAATAACAATCATCAAACCTACGGCAGCCCACGCGTATTTCATGCA
TTAAAGCGTGAAGGTATTACAACGAGTGAGAAGCGTGTTGCACGGTTGATGCGAGAAAATGGCTTACGCGCTAGAGCGCT
CAAGACTTATAGCAGGCCAGCTAAGGTGAAGTTCTTTTATAAAGCGATCAAAAACAATCGTAAAAACATAAGTAAGCCTG
ATGCTATCAATCAGCAATGGTCGGGAGATATTACGTACCTGAAAGTAGGATCGCGCTGGTATTACTTAGCCGTTGTATTA
GATTTATTTTCACGTCGTATCATTGGTTGGGCTTTTGGTCAGAACAAATCAACAGCGCTGACACTGAAAGCGCTGCAGCT
AGCAATAAAGAAGCGTAAACCGACACAACCCTTGTTATTTCATACTGACAGAGGCGCTGAATATCGAGCACATGTAGTGC
AGCAGTTCTTAGTTAAACATAACATTACGGCGAGTATGAACCGTCCAGGTTGTTGTACTGATAATGCTGAAGTTGAATCA
TTTTTTCATTCATTAAAAGCTGATTTAATCAGAGGGAATGTCTTCGCGACTACTGATAAATTACATTCAAAATTAAAAGG
TTACATGAACTATTTTTACAATAGACAACGATTGCATTCAAGTTTAGGATATAAAACACCTGCTGAGTTTGAATTGGCGG
TGAATTAA

Protein sequence : 
MATVSGGSPSERFGFIEKHKEALGVKYLCSWLDVSRSGFYAWRRRPRSMRAINDADLLLNIKQVFNNNHQTYGSPRVFHA
LKREGITTSEKRVARLMRENGLRARALKTYSRPAKVKFFYKAIKNNRKNISKPDAINQQWSGDITYLKVGSRWYYLAVVL
DLFSRRIIGWAFGQNKSTALTLKALQLAIKKRKPTQPLLFHTDRGAEYRAHVVQQFLVKHNITASMNRPGCCTDNAEVES
FFHSLKADLIRGNVFATTDKLHSKLKGYMNYFYNRQRLHSSLGYKTPAEFELAVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 4e-43 41
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 4e-43 41
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 4e-43 41