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Name : serS (CPS_2755) Accession : YP_269467.1 Strain : Colwellia psychrerythraea 34H Genome accession: NC_003910 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 2867882 - 2869162 bp Length : 1281 bp Strand : - Note : identified by similarity to SP:P09156; match to protein family HMM PF00587; match to protein family HMM PF02403; match to protein family HMM TIGR00414 DNA sequence : ATGCTTGATGCAAAACTACTTAGAACTGATTTAGATAATATCGCTCAACAACTTACCAAACGTAACTTTGTATTAGATAC AGAGGCGTTAAGTGCATTAGAAGAGCTACGTAAAGCTATCCAAGTGAAAACTCAAGAGCTGCAAAATGAACGAAATACTC GTTCAAAGTCTATTGGCCAAGCTAAAGCACGTGGCGAAGACATTGCACCATTACTTGCTCATGTAAGCCAGCTAGGTAAT GACCTTGATGCTGCTAAAACAGAGCAAGACGAAGTTTTAGCTAAAATTGATGCCATTGCTAGTGCTATTCCTAACCTTCT TGATGACTCTGTTCCAGAAGGTAAAGATGAAGATGACAACGTTGAAGTAAAACGTTGGGGCACGCCACGTGAATTCGATT TTGAAGTAAAAGATCACGTAGACTTAGGTTTTTCAGTAGATAAAGGCCTAGACTTTGAAAGTGGCGCTAAACTAGCTGGC ACTCGTTTTGTCGTTATGCGTGGCAAAATAGCGCGATTACATCGTGCTATTGCTCAGTTCATGCTTGATACCCATACCGA AGAACATGGTTACCAAGAAATGTACGTACCATACTTAGTTAATGCAGCGTCATTATACGGTACAGGCCAATTACCAAAAT TTGGTGAAGACTTATTTCACACGGACTTATCAAATAAAAAATTCTCATTGATCCCAACATCAGAAGTACCGTTAACTAAC TTAGTACGTGATGAAATTGTCGATGAAGATGACTTGCCAATCAAAATGACAGCACATACACCGTGTTTCAGAAGTGAAGC TGGCTCTGGTGGTCGTGATATTCGTGGGCTTATTCGCCAACATCAATTCGATAAAGTTGAAATGGTACAAATTGTTAAGC CTGAAACCTCAATGACTGCGCTTGATGAATTAACTCGTCACGCTGAAATCATTCTTGAGAAACTTGAATTACCTTACCGT ACTGTACAATTATGTAGTGGTGATGTTGGTTTTAGTGCCGCCAAAACCTTTGATTTAGAAGTATGGTTGCCTGCACAAGA TACTTATCGTGAAATTTCATCGTGTTCAAATATGGGTGCTTTCCAAGCTCGCCGTATGCAAGCACGCTTTAGAAATAATG AAACGAACAAACCAGAATTGTTACACACACTTAATGGCTCTGGTTTAGCGGTAGGGCGTACCTTGGTTGCTATTTTAGAA AACTACCAGCAAGCAGATGGAAGCATTAATGTTCCAACGGTATTGCAACCTTACATGGGTGGTTTAACTAACATAGGTTA A Protein sequence : MLDAKLLRTDLDNIAQQLTKRNFVLDTEALSALEELRKAIQVKTQELQNERNTRSKSIGQAKARGEDIAPLLAHVSQLGN DLDAAKTEQDEVLAKIDAIASAIPNLLDDSVPEGKDEDDNVEVKRWGTPREFDFEVKDHVDLGFSVDKGLDFESGAKLAG TRFVVMRGKIARLHRAIAQFMLDTHTEEHGYQEMYVPYLVNAASLYGTGQLPKFGEDLFHTDLSNKKFSLIPTSEVPLTN LVRDEIVDEDDLPIKMTAHTPCFRSEAGSGGRDIRGLIRQHQFDKVEMVQIVKPETSMTALDELTRHAEIILEKLELPYR TVQLCSGDVGFSAAKTFDLEVWLPAQDTYREISSCSNMGAFQARRMQARFRNNETNKPELLHTLNGSGLAVGRTLVAILE NYQQADGSINVPTVLQPYMGGLTNIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-103 | 57 |
