Gene Information

Name : CPS_2717 (CPS_2717)
Accession : YP_269429.1
Strain : Colwellia psychrerythraea 34H
Genome accession: NC_003910
Putative virulence/resistance : Resistance
Product : sulfatase
Function : -
COG functional category : R : General function prediction only
COG ID : COG2194
EC number : -
Position : 2834515 - 2836182 bp
Length : 1668 bp
Strand : +
Note : identified by match to protein family HMM PF00884; match to protein family HMM PF08019

DNA sequence :
ATGCCACATTTGTATCTTAAATCTAATTTTTTTCAAAGCGTAACCGCGAATAAATTAATACTTATCCTGAGTTGTTATTT
TGTTGTCGTTTTTAACTTAACATTCTTACTTAAAACCTATAATGCGGTTTTGTTATTAGATAAATACAACCTCCTATTCC
TGTTGAGTGTTCCCATTTTATTACTCAATATATTGTTGATTTTCTTTTCTGTTTTTTCAGTTAAATATTTATTAAAACCA
GCGCTAATAGTTTTTACCTTTATCTCAGCACTTATGACATATGCAACCTTTTCTTATGGCATCGTTTTTGATTATGGCAT
GATTGAAAATACGGTTAAAACCAGCAGTTCGGAAGCCTTTACTTACCTAAATGTTAATGCTTTTCTAATTGTTGCAGCAT
TATCAGTATTACCCATAATGTATTTATACAAGGTTAAGCTAACTTTTTCCCCACTTAAAACAGAGCTCACACAACGATTA
AAACTGCTCTCTTTATCGACATTATCATTCTTTATCATCGCTTTTTTCTTTTATGGTGATTACGCATCCGTTGGTCGAAA
TAATAGAACGTTAACGTCTTATATCACCCCTTTAAAAAGTGTTGTCAGTGGTTATAAGTTTATTCGAAATAATTACTTTA
ATGAACCGGCAACGTTCACTGTATTAGATAATTCGCCCATATTATTAACTGATAATGAAGCAGGTAAACGGGTAATATTG
ATGGTAGTTGGCGAAACAGCGCGTGCAGAAAGCTTTTCTCTCAATGGTTATGATAAACCAACCAATCAATTTACCCGTGT
TCATCACCCTATTTCGTTTAAAAACATGTCATCGTGTGGCACAGCAACGGCGGTATCTGTACCTTGCATGTTTTCTGCTC
TAGGTAGAAGTGACTACCAAAAGCAAGTAGCCAACAATCAACAGAACCTGTTGGATATCGTAAAACTTGCCAATGTTGAT
GTACTTTGGCTAGATAATAATGAAGGTTGTAAAGGTGCCTGCAACCGAGTTACCACCATAAATATGGATAAGAGCAAAAT
ACATAACTTATGCGATGGTGATTATTGTTTTGATGAAGTTCTGTTATCGCCGTTAAAAAATAAACTGAGCCATTTAACCC
ACCAAACTACCTTGATTGTTTTACACCTTATTGGTTCACATGGGCCAACCTATTACCGTCGATACCCTGAAAATTTCCCT
AAATTCTTACCTGATTGTCAACGTAGTGATATACAAAACTGTACTCAAGAACAAATCGTCAATACTTACGATAATACTAT
TGCATACAGCGACTATGTTTTATCCAAAATGATTGAAGAATTATCCTTGTTAGAAGAAAAAAACAATATAGATACCGCTA
TGCTTTATGTGTCTGACCATGGTGAATCACTTGGGGAGAACGGGCTTTATTTACATGGTTTTCCTTACGCCTTTGCACCA
ACACAACAAACGCACATACCCATGCTCTTTTGGAGCAATAATCAAAACAAAACTGATCAGAATTGTTTAAATAATTTAGC
TGACAATACATTTACACATGATAATGTCTTTCACAGTATTTTAGGATTAATGAAAGTTAAATCAAAAACATACAAGCCAA
ATTTTGATATATTTCATCAATGTAATACCCGTGATTTATTGGTTAATAATACGACTGATGAGCAATAA

Protein sequence :
MPHLYLKSNFFQSVTANKLILILSCYFVVVFNLTFLLKTYNAVLLLDKYNLLFLLSVPILLLNILLIFFSVFSVKYLLKP
ALIVFTFISALMTYATFSYGIVFDYGMIENTVKTSSSEAFTYLNVNAFLIVAALSVLPIMYLYKVKLTFSPLKTELTQRL
KLLSLSTLSFFIIAFFFYGDYASVGRNNRTLTSYITPLKSVVSGYKFIRNNYFNEPATFTVLDNSPILLTDNEAGKRVIL
MVVGETARAESFSLNGYDKPTNQFTRVHHPISFKNMSSCGTATAVSVPCMFSALGRSDYQKQVANNQQNLLDIVKLANVD
VLWLDNNEGCKGACNRVTTINMDKSKIHNLCDGDYCFDEVLLSPLKNKLSHLTHQTTLIVLHLIGSHGPTYYRRYPENFP
KFLPDCQRSDIQNCTQEQIVNTYDNTIAYSDYVLSKMIEELSLLEEKNNIDTAMLYVSDHGESLGENGLYLHGFPYAFAP
TQQTHIPMLFWSNNQNKTDQNCLNNLADNTFTHDNVFHSILGLMKVKSKTYKPNFDIFHQCNTRDLLVNNTTDEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1140 NP_286675.1 hypothetical protein Not tested TAI Protein 8e-88 45
Z1579 NP_287083.1 hypothetical protein Not tested TAI Protein 8e-88 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CPS_2717 YP_269429.1 sulfatase BAC0485 Protein 9e-87 41