|
Name : CPS_2053 (CPS_2053) Accession : YP_268781.1 Strain : Colwellia psychrerythraea 34H Genome accession: NC_003910 Putative virulence/resistance : Virulence Product : aldehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 2131525 - 2133024 bp Length : 1500 bp Strand : - Note : identified by match to protein family HMM PF00171 DNA sequence : ATGGAAAACTTAAATTCAGCCTATTGGCAAAAATTATCGCAAAATATTAAATTTCGTAACCAGGCCTTTATCAATGGTAC TTTTACTGATAGCACGTCAAATGAAAGCTATCAAGTAATTAATCCAGCGACAGAGGAAGTACTTGCATCTGTCACAGCTT GCAATTCACAAGATGTAGATAGTGCGGTAGCTTGCGCAAGAGAAACTTTTGAATCAGGTGTTTGGGCTGATAAATCACCT TCAGAGCGTAAAGCGGTTATCTTAAAATTAGCGCAACTCATCCAAGATAATAAAGAAGAACTTGCTCTGCTTGAAACATT AGATATGGGCAAACCAGTGATGGATGCGCTTAATATCGATATCGGTGGCGCATCGGCTATTCTAGCTTGGTATGGTGAAG CAGCAGATAAAATTAATGATGAAATAGCACCAACAGGTCCAGGCTCACTTGCCACGATTACAAAAGAAGCAATAGGTGTT GTTGCTGCTATTGTTCCATGGAACTTTCCTCTTGATTTAGCTATTTGGAAGTTAGGACCTGCACTTGCTGCGGGTAATAG CGTCATCGTAAAACCAGCAGAACAGTCACCACACTCTGTACTGCGTTTAGCTGAACTTGCTATTGAAGCAGGTGTACCTG CAGGCGTGTTTAATGTAGTAACGGGTCACGGCGCAGTTGTAGGTAAAGCCTTAGGTTTACATGAAGATATTGATGTTCTT ACTTTTACTGGCTCAACAGGAATAGGTAAACTATTTTTACAGTACAGCGCACAATCAAACATGAAAAGCGTTTGGTTAGA AACTGGCGGTAAAAGCCCTAACCTTGTTTTTGCTGATTGCGAAGATTTAGACAAAGCTGCTGATGGCGCAGCCATGGGGA TTTTCTTTAACCAAGGTGAAGTTTGTTCTGCTAATTCTAGATTGTTAGTTGAAAGCTCAATTAAAGATGTCTTTGTAGAA AAAATGATAACCCGTGCCAAGCAAGTTATTATGGGTCATCCGCTTAATACTAATACCACTATGGGTCCTATTGTTAGTGA TTTACAAGCGAGCCGAATCTTCTCAAAAATTGAAAAAGCTCAGCAAGAAGGTGCAACATTAGTTACTGGTGGTAAACGAG TAACAATTGATGGATCGTCTTTATATATTGAACCAACTATTTTTGATAACGTCGATAACAGCATGTCAATTGCACAAGAT GAAGTTTTTGGTCCTGTACTGTCAGTGATCAGCTTCGATACCGAAGCTGAAGCTATAGCTATTGCCAATGATACACCATA TGGTTTGGCAGCTTCCATTTGGACGGATAATTTGAGCCGAGCTCATCGAGTTGCCCGCAAGATTAAAGCCGGTACTATTT CAGTAAATACTGTAGATGCTTTAAGCCCAATGACACCTTTTGGTGGCTACAAACAATCGGGTATTGGACGAGATTTATCA ATTCATGCCTTTGATAAATATACAGAAACTAAAACCACTTGGATAAAATTTTCTGAATAA Protein sequence : MENLNSAYWQKLSQNIKFRNQAFINGTFTDSTSNESYQVINPATEEVLASVTACNSQDVDSAVACARETFESGVWADKSP SERKAVILKLAQLIQDNKEELALLETLDMGKPVMDALNIDIGGASAILAWYGEAADKINDEIAPTGPGSLATITKEAIGV VAAIVPWNFPLDLAIWKLGPALAAGNSVIVKPAEQSPHSVLRLAELAIEAGVPAGVFNVVTGHGAVVGKALGLHEDIDVL TFTGSTGIGKLFLQYSAQSNMKSVWLETGGKSPNLVFADCEDLDKAADGAAMGIFFNQGEVCSANSRLLVESSIKDVFVE KMITRAKQVIMGHPLNTNTTMGPIVSDLQASRIFSKIEKAQQEGATLVTGGKRVTIDGSSLYIEPTIFDNVDNSMSIAQD EVFGPVLSVISFDTEAEAIAIANDTPYGLAASIWTDNLSRAHRVARKIKAGTISVNTVDALSPMTPFGGYKQSGIGRDLS IHAFDKYTETKTTWIKFSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF SG19 | AAN62241.1 | putative aldehyde dehydrogenase | Not tested | PAGI-3(SG) | Protein | 7e-112 | 48 |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 1e-74 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CPS_2053 | YP_268781.1 | aldehyde dehydrogenase | VFG0082 | Protein | 4e-75 | 41 |
