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Name : deoA (CPS_1970) Accession : YP_268700.1 Strain : Colwellia psychrerythraea 34H Genome accession: NC_003910 Putative virulence/resistance : Unknown Product : thymidine phosphorylase Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0213 EC number : 2.4.2.4 Position : 2038824 - 2040140 bp Length : 1317 bp Strand : + Note : Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate DNA sequence : ATGTCTGTAACCGCTAAAATCATCCCTCAAGAGATTATTCGACTGAAACGTGATGGTAAAATATTAGATGAACAAGCGAT AAATGGCTTTGTTTCAGGCCTTGTTGATGGCAACTTTTCAGATAGCCAAGTTGGCGCTATGGCCATGGCTATTTTTCAAC AGGGTATGTCGATTGATGAAAGAGTCAATTTTACCAAGGCTATGATGCGCTCAGGAGAGGTTCTTAGCTGGGAAGGTTTT GATGGTCCTATTGTTGATAAGCATTCAACGGGTGGTGTCGGTGATAAAGTTAGCTTTATGTTAGCTGCTATCGTTGCTGC TTGCGGCGGTTATGTTCCTATGATTTCAGGGCGTGGTTTGGGCCATACTGGTGGTACCGCAGATAAACTTGAAAGTATTG CTGGTTTTAATGTACAACCCAGTATTAGTGAATTTAAACGTATTGTTAAAGACGTTGGTGTTGCCATTATTTCACAAACC GATAATTTAGCACCCGCCGATAAACGTTTGTATTCTATTCGTGATGTGACCGCTACAGTTGAATCTATTCCATTGATCAC CGCTTCTATCTTATCGAAGAAGCTTGCCGCAGGACTTGATGTCTTAGTGATGGATGTCAAGGTTGGCAATGGTGCCATGA TGAATAATTTAGATGATGCTAAAGCACTTGCACAAAGCATTACCAGTGTTGCTAACGGAGCGGGCGTTAAAACACAGGCT ATTATTACCGATATGAATCAAGTCTTGGGTACTAGTGCCGGTAACGCCATAGAAATGTATGAAACAGTTAAATACTTAAC CGGTAAACAACGAGAGCCGCGCTTACATAAAATTGTGCAAGCACTTGCTAGTGCAATGCTTATTAATACAAATCTAGCGA GTAGTGAAAAAGATGCCCGTGAGAAAATTGATAAGGTATTAAATTCAGGCTTAGCGGCTGAAAAATTTGATCGCATGGTA TCCGCGTTAGGTGGACCGAAAAACTTTATAGAAAAGCCTTGGGACTCAATGAAAAAGGCAAATGTTATTACTGAGGTGCG AGCATTACAGCATGGTTACATTGCGCAGACGGACACTCGTGCTATTGGCATGTCGGTGGTTGGTTTAGGTGGAGGGAGAA CGGCACCTACACAACAGGTAGATCACAGTGTTGGTTTTGATCGGATATTACCACTGGGTGTACAAGTGAATCGTGGCGAA GTGATTGCACGTTTACATGCTAAAGATGAAGACTCAGCCAATAGAGCCATTGAGCAATTTAATAATGCGATTACTTACTC TGAAGAGAGCCCTGAGCTACCACCGGTAATCTACTAA Protein sequence : MSVTAKIIPQEIIRLKRDGKILDEQAINGFVSGLVDGNFSDSQVGAMAMAIFQQGMSIDERVNFTKAMMRSGEVLSWEGF DGPIVDKHSTGGVGDKVSFMLAAIVAACGGYVPMISGRGLGHTGGTADKLESIAGFNVQPSISEFKRIVKDVGVAIISQT DNLAPADKRLYSIRDVTATVESIPLITASILSKKLAAGLDVLVMDVKVGNGAMMNNLDDAKALAQSITSVANGAGVKTQA IITDMNQVLGTSAGNAIEMYETVKYLTGKQREPRLHKIVQALASAMLINTNLASSEKDAREKIDKVLNSGLAAEKFDRMV SALGGPKNFIEKPWDSMKKANVITEVRALQHGYIAQTDTRAIGMSVVGLGGGRTAPTQQVDHSVGFDRILPLGVQVNRGE VIARLHAKDEDSANRAIEQFNNAITYSEESPELPPVIY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoA | YP_005163381.1 | Thymidine phosphorylase | Not tested | Not named | Protein | 1e-66 | 41 |
