Gene Information

Name : CPS_1930 (CPS_1930)
Accession : YP_268660.1
Strain : Colwellia psychrerythraea 34H
Genome accession: NC_003910
Putative virulence/resistance : Unknown
Product : sulfonate ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 1988731 - 1989519 bp
Length : 789 bp
Strand : +
Note : identified by similarity to SP:P97027; match to protein family HMM PF00005

DNA sequence :
TTGATTGAACTCAATGTCGCTATAAAAAATAAGTATTATGCAAACAGTGACCAAGCGGTATTAGCGCAATTGGATTTTAC
TGTGAAGCCTGGAGAGTTTGTTGCCCTCATAGGCCCGTCGGGTTGTGGAAAGTCGACCTTACTCAATATGATTAGTGGTC
TTGAAAATTGTTCGGGCCAGCACATCTCTTATAATGAGAACGCTTATAATGAGAACGCTTATAATGAACGGGCTTTGCAA
GAAGAGGGTGAAAGTAATAAAGCGTTACATCAACTCGGCTATATTTTTCAACAGCCCAGGTTAATGCCTTGGCTTACCGT
TCGAGAGAATATTGAGCTGATATTACAACCGAACCAGTTTCACAAAATTGATGATTTATTAGCGCAAGTTGGTTTAGCAA
ATGAAGGGGAGTATTTTCCAAGTCAACTTTCTGGTGGCATGCAACGACGGGTAAGCATCGCGCGTGCTTTTGCAATAAAT
CCACAGTTGCTGTTATTAGATGAGCCTTTTAATTCTCTTGATGCGCCTACTGCAGCACGATTACGACAACTGTTAATTGA
TTTGTGCGAACAAAGAGGTACTACCGTTGTGTTTGTAACCCATGATTTGCAAGAAGCTGTTTATTTAGCTGACCGCATTA
TTTTTATGAGTGACTCTCCTAGTACCATAGTTCATCAGAGCATTGTTGATTTGCCTAGGCCGCGTAAAGAGTCTGGGGTG
TCTGAGTTAGCATGGCAAGCAAAGCTTTTATCTAAGTACCCAGGCTTACTTGCGGGGCAAATTGACTAA

Protein sequence :
MIELNVAIKNKYYANSDQAVLAQLDFTVKPGEFVALIGPSGCGKSTLLNMISGLENCSGQHISYNENAYNENAYNERALQ
EEGESNKALHQLGYIFQQPRLMPWLTVRENIELILQPNQFHKIDDLLAQVGLANEGEYFPSQLSGGMQRRVSIARAFAIN
PQLLLLDEPFNSLDAPTAARLRQLLIDLCEQRGTTVVFVTHDLQEAVYLADRIIFMSDSPSTIVHQSIVDLPRPRKESGV
SELAWQAKLLSKYPGLLAGQID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 8e-31 41