Gene Information

Name : fliP (CPS_1512)
Accession : YP_268254.1
Strain : Colwellia psychrerythraea 34H
Genome accession: NC_003910
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 1554553 - 1555311 bp
Length : 759 bp
Strand : +
Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus

DNA sequence : 
ATGAAAAGAATTTCGTTATTCACCATCTTAACACTGTGCTTGCTCAGCATGAGTTTCGGTGCATTTGCCGAAGATTTGTC
TCTATCAGCATTAACATTGACAACCAACCCTGATGGCTCACAAGAGTATTCAGTAAACTTACAAATTTTGATTTTTATGA
CGGCGCTGAGTTTTATACCAGCCGCGGTTATTATGATGACGTCATTTACCCGTATTGTCGTGGTGATGGCTATTTTACGA
CAAGCTTTTGGTCTTCAGCAAACACCGTCTAATCAAGTGATTATCGGGTTAACCCTCTTTATGACGCTCTTTATTATGAC
ACCCGTTTATAATCAAATAGATAGAACTGCCATTCAACCTTATTTATCAGAGAATTTAACCTCTACTGAAGCAATTAACT
TGGGTAAGATCCCATTACGTGCCTTTATGTTAGAGCAGACACGCGTTAAAGACCTTGATACTTTAGCGGCAATGGCGGGC
ATTGATGCAGTTGATGAGCCAACTGACTTACCTATGACGGTAATTATTCCCGCTTTTATTATTAGTGAATTAAAAACTGC
TTTTCAGATTGGTTTTATCCTTTTTATCCCCTTTTTGATTATTGATTTGGTTGTTGCCAGTATTTTAATGGCGATGGGCA
TGATGATGCTTTCACCAATGATCGTATCTTTACCTTTTAAGCTAATGTTATTTGTTTTGGTTGATGGTTGGAACTTGGTT
ATTGGTACCATCGCAACCAGTTACGGAATGGGTAGTTAG

Protein sequence : 
MKRISLFTILTLCLLSMSFGAFAEDLSLSALTLTTNPDGSQEYSVNLQILIFMTALSFIPAAVIMMTSFTRIVVVMAILR
QAFGLQQTPSNQVIIGLTLFMTLFIMTPVYNQIDRTAIQPYLSENLTSTEAINLGKIPLRAFMLEQTRVKDLDTLAAMAG
IDAVDEPTDLPMTVIIPAFIISELKTAFQIGFILFIPFLIIDLVVASILMAMGMMMLSPMIVSLPFKLMLFVLVDGWNLV
IGTIATSYGMGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 5e-16 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_268254.1 flagellar biosynthesis protein FliP VFG1259 Protein 2e-53 63
fliP YP_268254.1 flagellar biosynthesis protein FliP VFG2016 Protein 3e-47 58
fliP YP_268254.1 flagellar biosynthesis protein FliP VFG2338 Protein 2e-41 53
fliP YP_268254.1 flagellar biosynthesis protein FliP VFG2494 Protein 1e-42 52