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Name : lysS (BCE_0075) Accession : NP_976403.1 Strain : Bacillus cereus ATCC 10987 Genome accession: NC_003909 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 80557 - 82056 bp Length : 1500 bp Strand : + Note : identified by match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM TIGR00499 DNA sequence : ATGGATAACATGAACCACGAAGAATTAAACGACCAATTGCTTGTTCGTCGTGAAAAGCTACATAACTTACGTGAGCAAGG GATCGATCCGTTCGGTAAACGTTTTGAACGTACAAATGCAACAAATGAATTATTAAGCCTATATGGAGAGTTCTCTAAAG AAGAATTAGAGGAGAAAGAAATCTCTGTTTCTATCGCTGGTCGTATTATGACAAAACGCGGTAAAGGAAAAGCTGGATTT GCACATATTCAAGATTTACATGGACAAGTTCAAATTTACGTTCGTAAAGATGCTGTTGGAGATGAAGAGTACGAATTATT TAAAACAGCAGATTTAGGTGACTTAGTAGGTATTGAAGGTAAAGTTTTCAAAACGAACGTTGGAGAACTTTCGGTGAAAG CAACGGGCTTTACGCTATTAACGAAATCTCTTCGTCCATTACCGGATAAATATCATGGACTAAAAGATGTTGAACAACGC TACCGTCAACGTTACTTAGACTTAATTACAAGTATGGAAAGCCGTGAAACATTTGTTACTCGCAGTAAAATCATTCGTGA AATGAGAAGATACTTAGATGACAATGGTTATCTTGAAGTGGAAACACCTATGATGCACGCAATTGCAGGTGGAGCTTCTG CGCGTCCTTTCATCACGCACCATAATGCGTTAGATATGGAATTATATATGCGTATCGCAATTGAACTTCATTTAAAACGC CTTATTGTGGGTGGATTAGAAAAAGTTTATGAAATCGGCCGTGTATTCCGTAACGAGGGTGTATCAACTCGTCATAATCC CGAGTTTACGATGATTGAATTATATGAAGCGTATGCTGATTATAAAGATATTATGAAACTAACAGAAAATATGGTTGCTC ATATCGCGAAGCAAGTACTAGGTACAACAACAATCCAGTATGGTGACTATGAAATTAATCTAGAACCAGAATGGACACGT CTTCATATGGTAGATGCAATTAAAGAACATTCTGGAGCAGATTTCTGGAATCCGATGAGTGTAGAAGAAGCGCGTGAACT TGCAAAAGAACATAATGTAGAAATTAAGGATACAATGGAAGTTGGTCATATTATTAATGAATTCTTCGAACAAAAAGTAG AAGATAAATTAATCCAACCAACATTTATTTACGGTCATCCGGTAGAAATTTCGCCACTTGCGAAAAAGAATGACGAAGAT CCACGATTCACAGATCGTTTCGAATTATTTATTGTTGCACGTGAACATGCAAATGCATTCACTGAATTAAATGATCCAAT TGATCAGAAAGAACGTTTTGAAGCACAATTAAAAGAACGCGAACAAGGTAATGATGAAGCTCACATGATGGATGATGATT ATATTGAAGCTCTTGAGTATGGTATGCCTCCTACAGGTGGACTAGGAATTGGTATTGATCGTCTTGTTATGTTATTAACG AATGCACCATCTATTCGTGACGTACTATTATTCCCTGCTATGCGTCATAAACAAGACTAA Protein sequence : MDNMNHEELNDQLLVRREKLHNLREQGIDPFGKRFERTNATNELLSLYGEFSKEELEEKEISVSIAGRIMTKRGKGKAGF AHIQDLHGQVQIYVRKDAVGDEEYELFKTADLGDLVGIEGKVFKTNVGELSVKATGFTLLTKSLRPLPDKYHGLKDVEQR YRQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETPMMHAIAGGASARPFITHHNALDMELYMRIAIELHLKR LIVGGLEKVYEIGRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMKLTENMVAHIAKQVLGTTTIQYGDYEINLEPEWTR LHMVDAIKEHSGADFWNPMSVEEARELAKEHNVEIKDTMEVGHIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDED PRFTDRFELFIVAREHANAFTELNDPIDQKERFEAQLKEREQGNDEAHMMDDDYIEALEYGMPPTGGLGIGIDRLVMLLT NAPSIRDVLLFPAMRHKQD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-121 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | NP_976403.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 1e-121 | 51 |
