Gene Information

Name : BCE_5395 (BCE_5395)
Accession : NP_981687.1
Strain : Bacillus cereus ATCC 10987
Genome accession: NC_003909
Putative virulence/resistance : Virulence
Product : caspsular polysaccharide biosynthesis protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1086
EC number : -
Position : 4983240 - 4985051 bp
Length : 1812 bp
Strand : -
Note : identified by similarity to SP:P39853; match to protein family HMM PF02719

DNA sequence :
TTGAGTTATCGAAAACGGCTCTCATTATTAATTTTATTAGATTCATTTATTGTATTAACTGCCGTGTATTTAAGTTATTG
GTTCATACATCCAAATATATTAAGCAAAATTCCTACGACAGTAATTATTAGTTCTATTACATTATTGTGTAGTCATCATA
TTTTTGCTGCTATTTATAAGCTTTATAACAAGGCGTGGGAATATGCAAGTATTGGGGAATTAAAGCAAATATTTAAAGCA
ATTACACTTTCCATTATTGTAACAGCAATTGTACAACAAATTATAAATCATGATATTTATGTTCGAATTTTAGTAATCGC
ATGGATGTTACACTTATTATTAATTGGTGGTTCACGTTTTGTATGGCGTATGTTCCGTGATACGTATATTACTAAAGCTG
CTGATAAAAAACGAACACTAATTATTGGTGCAGGTTCAGCAGGGACAATGGTAGTACGTCAATTACAACATAATAAAGAA
GCAGATCTATATCCAATTGCATTTGTTGATGATGATAGAAATAAACAGAAATTAGAAATTTATAATGTGCCGGTTGTGGG
TACAACAAATCATATTCAAGAAATTGTGGAAGATAACGATATTGAACATATTATTATTGCAATTCCTTCTTTAAATAGAA
ATCAAATAAACGAGATCTTTGAGAAGTGTAGAAAAACGAAGGCGAAAACGCAAATTGTACCAATGCTTGAAGATCTTTTA
GATGGCAAAGTTTCTGTTAATGAATTCCGAGATGTACAAGTGGAAGATTTATTAGGAAGAGAGCCAATCCAATTAGATGA
TGCAGGAATTGGAGAAAAAATTGCTGGTAAAACAATTTTAGTAACTGGTGCTGGTGGATCAATTGGATCAGAAATTTGCC
GTCAAGTAATGAAGTATAAACCAGCAAAAATCGTACTTTTAGGACATGGTGAAAACAGCATTTATAATATCGAAATGGAA
ATGCGAGTTACGTATAAAGATACAGTTGAAATTACGACAGAAATTGCTGATATTCAAGATCGTCATAAAATCTTTGAAAT
CATGAAAAAACATCAGCCATATATCGTATATCATGCAGCGGCACATAAACATGTACCTTTAATGGAACGTAATCCTGAAG
AGGCTGTAAAAAACAATATTTTTGGCACAAAAAATGTAGCAGAAGCTGCAGATACATTTAAAGTAAATACGTTTGTTATG
GTTTCTACAGATAAAGCTGTAAATCCAACGAATGTAATGGGAGCTACGAAACGATTTGCTGAAATGCTTGTTCAACATAT
GGCGTCTGTAAGTACAGGTACGCGATTTGTAGCTGTTAGGTTTGGTAACGTCCTTGGAAGTAGGGGAAGTGTAATCCCGC
TATTTAAGAAGCAAATTCAAAAAGGCGGACCTGTAACAGTTACTCATCCTGATATGATTCGTTACTTTATGACAATACCA
GAAGCTTCTAGGTTAGTAATTCAAGCTGGTACACTAGCTAGAGGTGGAGAATTATTTGTTCTCGATATGGGAGACCCAGT
AAAGATCGTGGATTTAGCTAAAAACTTAATTACCCTTTCGGGGTATTCTATTGAGGAAATTGGAATTGAGTTTACTGGAT
TAAGACCAGGTGAAAAAATGTATGAAGAGTTATTAAATGAGGGTGAGATTCATCCAAAGCAAATATTCCCTAAAATTCAT
ATAGGAAAGGCTGTTTTAATGGATCAAACGATTCTAAGACAGTTTATGAATGATTTTGAAGGAATTAGTAAAGAAGAAAT
AAGAGAACGATTATTAGATATTGCAAATAATAAAGTTAATTTAAACAACTAA

Protein sequence :
MSYRKRLSLLILLDSFIVLTAVYLSYWFIHPNILSKIPTTVIISSITLLCSHHIFAAIYKLYNKAWEYASIGELKQIFKA
ITLSIIVTAIVQQIINHDIYVRILVIAWMLHLLLIGGSRFVWRMFRDTYITKAADKKRTLIIGAGSAGTMVVRQLQHNKE
ADLYPIAFVDDDRNKQKLEIYNVPVVGTTNHIQEIVEDNDIEHIIIAIPSLNRNQINEIFEKCRKTKAKTQIVPMLEDLL
DGKVSVNEFRDVQVEDLLGREPIQLDDAGIGEKIAGKTILVTGAGGSIGSEICRQVMKYKPAKIVLLGHGENSIYNIEME
MRVTYKDTVEITTEIADIQDRHKIFEIMKKHQPYIVYHAAAHKHVPLMERNPEEAVKNNIFGTKNVAEAADTFKVNTFVM
VSTDKAVNPTNVMGATKRFAEMLVQHMASVSTGTRFVAVRFGNVLGSRGSVIPLFKKQIQKGGPVTVTHPDMIRYFMTIP
EASRLVIQAGTLARGGELFVLDMGDPVKIVDLAKNLITLSGYSIEEIGIEFTGLRPGEKMYEELLNEGEIHPKQIFPKIH
IGKAVLMDQTILRQFMNDFEGISKEEIRERLLDIANNKVNLNN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1D AAA64643.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 9e-146 57
SSP0063 YP_300153.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 1e-149 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BCE_5395 NP_981687.1 caspsular polysaccharide biosynthesis protein VFG1300 Protein 2e-142 54