Gene Information

Name : BCE_1956 (BCE_1956)
Accession : NP_978272.1
Strain : Bacillus cereus ATCC 10987
Genome accession: NC_003909
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1890479 - 1891177 bp
Length : 699 bp
Strand : +
Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00486

DNA sequence : 
ATGGAGAAAAATTCAATTTTAATTGTAGATGATGATCAAGATATTGTTAGATTTATGAACGTGAATTTAATGCAAGAAGG
TTTTAAAGTTTTTAGTGCTCATAATGGAGAAGAGGCTTTAGAAATAATAAATAAAAATAACATTCAACTTGCTATTTTGG
ATATTATGATGCCACAAATGGATGGGATAGAATTGTGCAGAAGGATTAGAGAGAAACATAGTTTACCAATTATGTTTTTA
AGTGCAAAATCATCGGATGTAGATAAAGTAATTGGATTTAGTACTGGGGCAGATGATTATATAGTGAAGCCGTTTAGTAC
AATTGAATTTATAGCGAGAGTGAAAGCTCAATTAAGAAGGTATACATATTTCAATCAAAATGCTGTCCAAGTAATAAAAA
AGAAAATAAACATTAGAGGTTTAGAAATAGATGAAGTGTCTAGAACAGTAATGTTATATGGAGAAACAATCAATCTTACA
AAAACGGAATATGATATTTTGTATTTAATGGCAGCTGCAAAGAATCGTGTATTTACTATTGAAGAAATATATGAGAGCGT
TTGGAAAGAAAGAGCCTATGAAAGCAATAATACAGTAATGGTTCATATCGCAAGGTTAAGAAATAAAATTGAAGAGGATC
CAAAAGAACCGAAGTTTATTCAAAATGTTTGGGGAGTCGGATATAAAATTGAAGATTAA

Protein sequence : 
MEKNSILIVDDDQDIVRFMNVNLMQEGFKVFSAHNGEEALEIINKNNIQLAILDIMMPQMDGIELCRRIREKHSLPIMFL
SAKSSDVDKVIGFSTGADDYIVKPFSTIEFIARVKAQLRRYTYFNQNAVQVIKKKINIRGLEIDEVSRTVMLYGETINLT
KTEYDILYLMAAAKNRVFTIEEIYESVWKERAYESNNTVMVHIARLRNKIEEDPKEPKFIQNVWGVGYKIED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 9e-36 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BCE_1956 NP_978272.1 DNA-binding response regulator AF155139.2.orf0.gene Protein 5e-58 50
BCE_1956 NP_978272.1 DNA-binding response regulator AM180355.1.gene1830. Protein 4e-53 48
BCE_1956 NP_978272.1 DNA-binding response regulator FJ349556.1.orf0.gene Protein 4e-55 47
BCE_1956 NP_978272.1 DNA-binding response regulator AF130997.1.orf0.gene Protein 7e-51 46
BCE_1956 NP_978272.1 DNA-binding response regulator NC_005054.2598277.p0 Protein 3e-47 44
BCE_1956 NP_978272.1 DNA-binding response regulator NC_014475.1.orf0.gen Protein 3e-47 44
BCE_1956 NP_978272.1 DNA-binding response regulator DQ212986.1.gene4.p01 Protein 5e-53 44
BCE_1956 NP_978272.1 DNA-binding response regulator NC_003923.1003417.p0 Protein 2e-38 43
BCE_1956 NP_978272.1 DNA-binding response regulator NC_013450.8614146.p0 Protein 2e-38 43
BCE_1956 NP_978272.1 DNA-binding response regulator NC_002951.3238224.p0 Protein 2e-38 43
BCE_1956 NP_978272.1 DNA-binding response regulator NC_007793.3914065.p0 Protein 2e-38 43
BCE_1956 NP_978272.1 DNA-binding response regulator NC_002758.1121390.p0 Protein 2e-38 43
BCE_1956 NP_978272.1 DNA-binding response regulator NC_010079.5776364.p0 Protein 2e-38 43
BCE_1956 NP_978272.1 DNA-binding response regulator NC_002952.2859858.p0 Protein 2e-38 43
BCE_1956 NP_978272.1 DNA-binding response regulator NC_007622.3794948.p0 Protein 2e-38 43
BCE_1956 NP_978272.1 DNA-binding response regulator AF162694.1.orf4.gene Protein 2e-46 43
BCE_1956 NP_978272.1 DNA-binding response regulator EU250284.1.orf4.gene Protein 5e-44 43
BCE_1956 NP_978272.1 DNA-binding response regulator NC_012469.1.7685629. Protein 1e-36 43
BCE_1956 NP_978272.1 DNA-binding response regulator AE015929.1.gene1106. Protein 1e-32 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BCE_1956 NP_978272.1 DNA-binding response regulator VFG1563 Protein 5e-36 41