Gene Information

Name : XCC0610 (XCC0610)
Accession : NP_636002.1
Strain : Xanthomonas campestris ATCC 33913
Genome accession: NC_003902
Putative virulence/resistance : Unknown
Product : ISxcC1 transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 733928 - 734695 bp
Length : 768 bp
Strand : -
Note : -

DNA sequence :
GTGGTTTGCGTGGCGCGCTCGACAGTGCGCTATCGGCGTCGTCCAGATCGGGATGAGGAGGTCATTGCGCTGTTGTCCGA
ATTGGCCGAACGCTTTCCCGAGCGTGGTTTTGGAAAGCTCTTTCAGATCATCCGCCGTCGCGGACATGTGTGGAATCACA
AAATGGTGTGGCGCGTGTATTGCCTGATGAAGCTCAATCAACGTCGTCGCAGCAGGCGCCGGGTTCCGGCCCGTCATCCA
CAACCGTTGGCATGCGGAGCACACCCCAATGCCGGATGGTCGATCGACTTCATGTCCGATGCGCTGTGGGATGGTCGACG
CTTCCGCACGTTCAATGTCATCGACGATTTCAGTCGGGAAGCCTTGGCGATCGAAGTGGACTTGAATCTTCCGGCCGACC
GCGTCATCCGCACCTTGGAACGCATCGCAGCCTGGCGCGGCTACCCCGGCAAACTTCGCCTGGACAATGGCCCGGAGTTT
GTCGCGTTGGCCTTGGCCGAGTGGGCCGAGCGCAAAGGTATCGCATTGGATTTCATCGAGCCGGGACGGCCGATGCAAAA
CGGTTTCATCGAACGCTTCAACGGCAGCTACCGGCGCGGCGTGCTGGACATGCACATCTTCCGCACGCTGAGCGAGGTTC
GCGAACAGACCGAACACTGGCTGGCCGACTACAACCAGCAGATACCGCACGACAGCCTGGGCGGGCTGACGCCCGCAGAG
TTCCGTGATCAACATCAACCGCAGACCTCTAGCTTTGGCTGGCATTGA

Protein sequence :
MVCVARSTVRYRRRPDRDEEVIALLSELAERFPERGFGKLFQIIRRRGHVWNHKMVWRVYCLMKLNQRRRSRRRVPARHP
QPLACGAHPNAGWSIDFMSDALWDGRRFRTFNVIDDFSREALAIEVDLNLPADRVIRTLERIAAWRGYPGKLRLDNGPEF
VALALAEWAERKGIALDFIEPGRPMQNGFIERFNGSYRRGVLDMHIFRTLSEVREQTEHWLADYNQQIPHDSLGGLTPAE
FRDQHQPQTSSFGWH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 5e-68 60
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 5e-33 45
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 2e-37 42