Gene Information

Name : metB (XCC0598)
Accession : NP_635990.1
Strain : Xanthomonas campestris ATCC 33913
Genome accession: NC_003902
Putative virulence/resistance : Resistance
Product : cystathionine gamma-synthase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 719235 - 720434 bp
Length : 1200 bp
Strand : +
Note : -

DNA sequence :
ATGTCCAACCGCACCGCAAACAGCCACGATGGCGAGCGCGCGCTGTCGCTCGCAACGCTGGCGATCCATGGTGGACAGTC
GCCGGACCCCAGCACCGGGGCGGTGATGCCGCCGATCTACGCGACGTCCACCTATGCGCAGTCCAGCCCGGGCGAGCATC
AGGGCTTTGAGTACTCGCGGACCCACAACCCTACGCGTTTTGCCTATGAGCGCTGTGTTGCCGTGCTGGAAGGCGGCACC
CGCGGGTTTGCCTTCGCCTCCGGCATGGCCGCGACCTCCACAGTGATGGAGTTGTTGGACGCCGGCAGCCACGTGGTAGC
GACCGATGACCTGTACGGCGGCTCGTTCCGTCTGTTCGAGCGTGTGCGTCGCCGCACCGCCGGCCTGGACTTCAGTTTCG
TCGACCTGACCGACCCGGCCGCGTTCGAGGCCGCGATCCGCCCGACCACCAAGATGGTCTGGATCGAAACCCCGACCAAC
CCGATGCTCAAGCTGGTCGACATCGCCGCCATTGCGGCGATCGCGCGTAGGCACGGCCTGCTGGTGGTGGTGGACAACAC
CTTCGCCTCGCCGATGCTGCAGCGCCCGCTGGAATTGGGCGCCGACCTGGTGGTGCATTCGGCCACCAAGTACCTCAATG
GCCACTCGGACATGGTGGGCGGCATCGCCGTGGTCGGCGACAACGCCGAACTCGCCGAACAGATGGCCTTCCTGCAGAAC
TCGATCGGCGGCGTACAAGGCCCGTTCGACAGCTTCCTGGCCCTGCGCGGGCTCAAGACCCTGCCGCTGCGCATGCGCGC
GCACTGCGAAAACGCCCTGGCGCTGGCGCAGTGGCTGGAGACCCACCAGGCGATCGAAAAAGTGATCTACCCCGGCTTGG
CCTCGCACCCGCAGCACGCACTCGCCAAGCAGCAGATGTCCGGCTTCGGCGGCATCGTCTCGATCGTCCTCAAGGGCGGC
TTCGAGGCAGCCAAGCGTTTCTGCGAAAAGACCGAACTGTTCACCCTGGCCGAATCGTTGGGTGGTGTGGAAAGTTTGGT
CAATCATCCCGCCGTCATGACCCATGCCTCGATCCCTGTGGCCCGCCGTGAACAGCTAGGCATCAGCGATGCGCTGGTGC
GGCTGAGTGTGGGGGTTGAGGATGTGGGGGATTTGCGGGGGGATTTGGAGCGTGCGCTTGAGGCGTCTCAGTCTCCATGA

Protein sequence :
MSNRTANSHDGERALSLATLAIHGGQSPDPSTGAVMPPIYATSTYAQSSPGEHQGFEYSRTHNPTRFAYERCVAVLEGGT
RGFAFASGMAATSTVMELLDAGSHVVATDDLYGGSFRLFERVRRRTAGLDFSFVDLTDPAAFEAAIRPTTKMVWIETPTN
PMLKLVDIAAIAAIARRHGLLVVVDNTFASPMLQRPLELGADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQN
SIGGVQGPFDSFLALRGLKTLPLRMRAHCENALALAQWLETHQAIEKVIYPGLASHPQHALAKQQMSGFGGIVSIVLKGG
FEAAKRFCEKTELFTLAESLGGVESLVNHPAVMTHASIPVARREQLGISDALVRLSVGVEDVGDLRGDLERALEASQSP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 9e-82 50
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 5e-83 50
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 4e-56 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
metB NP_635990.1 cystathionine gamma-synthase BAC0207 Protein 3e-68 47