Gene Information

Name : actP (XCC4057)
Accession : NP_639396.2
Strain : Xanthomonas campestris ATCC 33913
Genome accession: NC_003902
Putative virulence/resistance : Resistance
Product : acetate permease
Function : -
COG functional category : R : General function prediction only
COG ID : COG4147
EC number : -
Position : 4813117 - 4814844 bp
Length : 1728 bp
Strand : -
Note : member of the sodium:solute symporter family; cotranscribed with the acs gene which encodes acetyl coenzyme A synthase; mutations affect acetate uptake

DNA sequence :
ATGAGCAAGACTTCGCGCCTTCTCCTGATTTTGGCCGGCCTGCTGCCGGCCGGCCTCGCGCTGGCCGCCGGCGGCGACAT
GGGCCAGGTCGACAAGCAACCCACCAACTGGGTGGCGATCGGCATGTTCGGCTTCTTCGTGCTGGGCACCTTGTGGATCA
CCAAATGGGCGGCCGCCAAGACCAAGTCGGCGGCTGACTTCTACACCGCCGGCGGCGGCATCACCGGGTTTCAGAACGGC
CTGGCGATCGCCGGCGACTTCATGTCGGCTGCCTCGTTCCTGGGCATTACCGCGGCGGTGATGGCCAACGGCTACGACGG
CCTGATCTACGCGATCGGCTTTCTGGTCGGCTGGCCCATCCTGACCTTCCTGATGGCCGAACGGCTGCGCAACCTCGGCA
AGTACACCTTTGCCGACGTGGCCGGCTACCGCTTCGCGCCGACCGCCATCCGCAGCTTTGCCGCATCGGGCACGCTGGTG
GTGGTGCTGTTCTATCTGATTGCACAGATGGTCGGCGCCGGTGCGTTGATCAAGTTGCTGTTTGGCCTGGACTACTGGGT
GGCGGTCACCCTGGTCGGCGTGCTGATGATGGTCTACGTGCTGTTCGGCGGCATGACCGCCACCACCTGGGTGCAGATCA
TCAAGGCGGTGCTGCTGCTGACCGGCGTGACCTTCATGGCCGTGGCGATCATGTGGCACTTCAACTTCAGCTTCGAGGCG
CTGTTTGCCGAGGGCGTGCGGGTGAAGACCGCGATTGCGGCCAATGGCGGTGCATCGCCTGAGGATGCAGCCAAGGCGGG
CCTGTCGATCATGGGGCCGGGCGGCTTTGTGAAGGACCCGATCTCGGCGATCTCCTTCGGTATGGCGCTGATGTTCGGTA
CCGCCGGGCTGCCGCACATCCTGATGCGCTTCTTCACCGTTCCCGATGCCAAGCAGGCACGCAAGTCGGTGCTGTGGGCC
ACCACCTGGATCGGCTACTTCTACATCCTGATCTTCATCATCGGCTTCGGTGCGATCGCGCTGGTGCTGACCAACCCGCA
GTTCGCCGATGTCGCCACCGGCACCATCCACGGCGGCAAGGGCGCGGCCAACATGGCGGCGGTGCTGGTCGGTAACGCCG
TAGGCGGCAACGTGTTCATGGGCTTCATCTCGGCGGTAGCCTTTGCCACCATCCTGGCGGTGGTCGCAGGCCTGACCCTG
TCCGGCGCCTCGGCGGTGTCGCATGACCTGTACGCCACGGTGATCAAGAAGGGCAACCCGGCGCCGGGTTCGGAGCTGAA
GGTCTCGCGTGCCACCACCCTGGTGCTGGGCGTGATCGCCGTGCTGCTGGGCATCGTGTTCGAGAAGCAGAACGTGGCCT
TCATGGTGTCGCTGGCCTTCGCCATCGCCGCCTCGGCCAACTTCCCGGTGCTGATCCTGTCCTTGTTGTCGAAGAACTGC
ACCACGCGTGGTGCGGTGGTCGGCGGCTTCCTGGGCCTGATCTCCTCGCTGGTGCTCACGGTGCTGTCGCCGTCGGTGTG
GGTGGACACGCTGGGTAACGCGGCCGGTTCGGCGCCGTTCCCGTACACCTCGCCGGCGCTGTTCTCGATGACGATTGGTT
TCGTCGGTATCTGGCTGTTCTCGGTGCTGGACCGCAGCCCGCAGGCGGCCAACGAACGCGCCGCGTTCAAGGCACAGCAG
ATCCGTGCCGAAACCGGCCTGGGTGCGTCCGGCGCCTCCGGTCACTGA

Protein sequence :
MSKTSRLLLILAGLLPAGLALAAGGDMGQVDKQPTNWVAIGMFGFFVLGTLWITKWAAAKTKSAADFYTAGGGITGFQNG
LAIAGDFMSAASFLGITAAVMANGYDGLIYAIGFLVGWPILTFLMAERLRNLGKYTFADVAGYRFAPTAIRSFAASGTLV
VVLFYLIAQMVGAGALIKLLFGLDYWVAVTLVGVLMMVYVLFGGMTATTWVQIIKAVLLLTGVTFMAVAIMWHFNFSFEA
LFAEGVRVKTAIAANGGASPEDAAKAGLSIMGPGGFVKDPISAISFGMALMFGTAGLPHILMRFFTVPDAKQARKSVLWA
TTWIGYFYILIFIIGFGAIALVLTNPQFADVATGTIHGGKGAANMAAVLVGNAVGGNVFMGFISAVAFATILAVVAGLTL
SGASAVSHDLYATVIKKGNPAPGSELKVSRATTLVLGVIAVLLGIVFEKQNVAFMVSLAFAIAASANFPVLILSLLSKNC
TTRGAVVGGFLGLISSLVLTVLSPSVWVDTLGNAAGSAPFPYTSPALFSMTIGFVGIWLFSVLDRSPQAANERAAFKAQQ
IRAETGLGASGASGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01502.1 putative amino acid transport protein Not tested PAGI-1 Protein 2e-95 54

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
actP NP_639396.2 acetate permease BAC0564 Protein 1e-119 64
actP NP_639396.2 acetate permease BAC0570 Protein 1e-107 60