Gene Information

Name : XCC3971 (XCC3971)
Accession : NP_639310.1
Strain : Xanthomonas campestris ATCC 33913
Genome accession: NC_003902
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 4706917 - 4707117 bp
Length : 201 bp
Strand : -
Note : -

DNA sequence :
ATGAACAGCCGCGTGCGGGAACTGCGCGAGGCCAGTGGCTGGTCGCAAGGGGAGTTGGGCGAACGGCTGGGCGTGTCGCG
GCAAACGATCAACGCGCTGGAGACCGGCAAGTACGATCCCAGCCTGCCGTTGGCGTTTCGCATCGCGCGTCTGTTTGGGG
AATCGATCGAGCACGTCTTCCTGTTTGAAGACGGGCAGTAG

Protein sequence :
MNSRVRELREASGWSQGELGERLGVSRQTINALETGKYDPSLPLAFRIARLFGESIEHVFLFEDGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 2e-11 50
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 3e-06 45
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 2e-06 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XCC3971 NP_639310.1 transcriptional regulator VFG2175 Protein 1e-06 45
XCC3971 NP_639310.1 transcriptional regulator VFG2168 Protein 1e-06 45