Gene Information

Name : hemC (XCC3511)
Accession : NP_638857.1
Strain : Xanthomonas campestris ATCC 33913
Genome accession: NC_003902
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 4179597 - 4180511 bp
Length : 915 bp
Strand : -
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence : 
ATGACCACGCTGCGCATCGCCACCCGTAAGAGCCCGCTTGCCCTCTGGCAGAGCGAACACGTCGCCACCGCGCTGCGCCA
GCACCACCCCGGGCTGGAGGTCGTGCTGGTGCCGATGAGCACCCGCGGCGATGAAGTGCTGGACCGCTCGCTGGCCGCCA
TCGGCGGCAAGGGCCTGTTCCTCAAGGAACTGGAGCTGGCCATGCTGCGCGGCGAGGCCGATTGCGCCGTGCACTCGCTC
AAGGACGTGCCGATGGAGCTGGACGCGCCGTTCGTGCTGCCGGCCATCCTGGAACGCGGCGACCCGGCCGATGCGCTGGT
GTCCAACCTCTACGCCACCTTGCAGGCCCTGCCGCTGGGCGCACGCGTGGGTACCTCGTCGTTACGCCGCCAGGCGCAGT
TGCGCGCCGCGCGCCCGGACCTGGAATTGATCGACCTGCGCGGCAACGTCAACACCCGCCTGGCCAAGCTCGACAACGGC
GGCTACGACGCCATCGTGCTGGCCTGCGCCGGACTGCAGCGGCTGGGCCTGGAAGCCCGCATCACCGCGCGGCTGGACGC
ACCGGAGTGGCTGCCCGCCCCGGCGCAGGGCGCGGTGGCGGTGGAATGCCGCGGCGACGATGCCCGCATCCACGACCTGC
TGGCAGTGCTGGATGCCGGCCGCACGCGCGCCTGCGTCGAGGCCGAGCGCGCGATGAATCGCGCCCTGCACGGCAGTTGC
CACGTGCCGGTGGCTGCCTTCGCGCGCTGGGAAGGCGAGGACCTGTTCCTGCAGGGCATGGTGGGCAGTGCCAGCGACGG
CCGCCTGATCCACGCCGAGGCGCACGGCAGCCCTGACGCTACCGAAGACCTCGGCCGCCTCGTCGCCGACGGCCTGTTCG
AAAAGGGCGCCGCACAGCTGCTGGCGGAGCTGTAA

Protein sequence : 
MTTLRIATRKSPLALWQSEHVATALRQHHPGLEVVLVPMSTRGDEVLDRSLAAIGGKGLFLKELELAMLRGEADCAVHSL
KDVPMELDAPFVLPAILERGDPADALVSNLYATLQALPLGARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNG
GYDAIVLACAGLQRLGLEARITARLDAPEWLPAPAQGAVAVECRGDDARIHDLLAVLDAGRTRACVEAERAMNRALHGSC
HVPVAAFARWEGEDLFLQGMVGSASDGRLIHAEAHGSPDATEDLGRLVADGLFEKGAAQLLAEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 3e-57 52
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 3e-57 52