Gene Information

Name : hslU (XCC3493)
Accession : NP_638839.1
Strain : Xanthomonas campestris ATCC 33913
Genome accession: NC_003902
Putative virulence/resistance : Unknown
Product : ATP-dependent protease ATP-binding subunit HslU
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG1220
EC number : -
Position : 4160067 - 4161434 bp
Length : 1368 bp
Strand : -
Note : heat shock protein involved in degradation of misfolded proteins

DNA sequence :
ATGCCTAATATCGATACCGCCACCATGACTCCGCGCGAAATCGTGCAGGAGCTCGACCGCCATATCGTCGGCCAGCACGA
TGCCAAGCGTGCGGTGGCCATTGCGCTGCGCAATCGCTGGCGGCGCATGCAGTTGCCGGAAGAATTGCGCAACGAAGTGA
TGCCCAAGAACATCCTGATGATCGGCCCCACCGGCGTGGGCAAGACCGAGATCGCGCGGCGTCTGGCCACGCTGGCCAAT
GCGCCGTTCGTCAAGGTGGAAGCCACGCGTTTCACCGAAGTGGGCTACGTCGGCAAGGATGTGGAACAGATCATTCGCGA
CCTGGCCGATACCTCGGTCAAGTTGTACCGCGAGCAGGCCAAGGTGCGCGTGCGCAACCAGGCCGAAGAGCGCGCCGAAG
ATCGCATCCTGGATGCATTGTTGCCGCGACGCTCGGCCGGCATCGGCTTCGACCCGGAGGCGGCGCGTCATGAGCCGTCG
GCGCAGGACAATGAAACCCGCATCAAGTTCCGCCGCATGTTGCGTAACGGCGAACTGGACGAGCGCGAGATCGAACTGGA
AGTGGCGGTCAACGCCAGCATGGACATCATGACCCCGCCGGGCATGGAGGAAATGGGCCAGCAGCTACGGCAGATGTTCT
CCAACCTGGGTGGCGGCAAGTCGCAGAAGCGCAAGCTCACCATCAAGGCCGCGCGCCCGCTGTTGATCGAGGAAGAAGCC
GGCAAGCTGGTCAACGAAGACGACATCCGCACCGCGGCGATCGAGGCGTGCGAGCAGCACGGCATCGTGTTCATCGACGA
GATCGACAAGGTGGCCAAACGTGGTGAAGCCGGTTCGTCCGGTGGCGATGTCAGCCGCGAGGGCGTGCAGCGCGATCTGC
TGCCGCTGGTGGAAGGTTCCAACGTGTCCACCAAGTACGGCACGGTCAAGACCGACCACATCCTGTTCATTGCTTCGGGC
GCGTTCCATCTGGCCAAGCCCAGCGATCTGATTCCGGAATTGCAGGGCCGCTTCCCGATCCGCGTGGAATTGACCGCGCT
GACCAAGGCCGATTTCGTGCGCATCCTCACCGAGCCCAAGGCGGCGTTGATCAAACAGTACGAAGCCTTGCTGCAGACCG
AAGGTGTGGCCTTGACCTTCGGCGCCGATGCGGTGGACCGCCTGGCCGAGATTGCCGCGCAGGTGAACGAGCGGCAGGAA
AACATCGGTGCGCGGCGTCTGCATACGGTGCTGGAGCGCTTGCTCGATGTGCTGAGCTACGAGGCGCCCGACCGCGATGG
CCAGAGCGTCACCGTGGATGCGGCCTACGTGGATGCGCAGTTGGGCGAGCTGGTCCAGGATCCGGATCTGAGCCGTTACA
TCTTGTGA

Protein sequence :
MPNIDTATMTPREIVQELDRHIVGQHDAKRAVAIALRNRWRRMQLPEELRNEVMPKNILMIGPTGVGKTEIARRLATLAN
APFVKVEATRFTEVGYVGKDVEQIIRDLADTSVKLYREQAKVRVRNQAEERAEDRILDALLPRRSAGIGFDPEAARHEPS
AQDNETRIKFRRMLRNGELDEREIELEVAVNASMDIMTPPGMEEMGQQLRQMFSNLGGGKSQKRKLTIKAARPLLIEEEA
GKLVNEDDIRTAAIEACEQHGIVFIDEIDKVAKRGEAGSSGGDVSREGVQRDLLPLVEGSNVSTKYGTVKTDHILFIASG
AFHLAKPSDLIPELQGRFPIRVELTALTKADFVRILTEPKAALIKQYEALLQTEGVALTFGADAVDRLAEIAAQVNERQE
NIGARRLHTVLERLLDVLSYEAPDRDGQSVTVDAAYVDAQLGELVQDPDLSRYIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hslU YP_003728753.1 heat shock protein HslU Not tested cag PAI Protein 4e-101 48