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Name : xcsF (XCC3423) Accession : NP_638769.1 Strain : Xanthomonas campestris ATCC 33913 Genome accession: NC_003902 Putative virulence/resistance : Virulence Product : type II secretion system protein F Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 4073931 - 4075127 bp Length : 1197 bp Strand : - Note : - DNA sequence : ATGGCGAAGTTTGACTACACCGTGCTGGATCTGCACGGCCGCAATCGCCACGGCGTGATCAGCGCCGACAGCGTGCGCAG TGCGCGCAGCTTGCTGGAGCAGCGCCAATGGGTGCCATTGCGGGTGGAGCCGGCAGCGGCTACCACGCCGATGCGCGCGG CGCGCTTCAGCGGCAAGGACCTGGTGTTGTTCACCCGCCAGCTCGCCACCCTGGTGGACACCGCACCGCTGGAAGAAGCG CTGCGTACCATCGGCACCCAGTCCGAGCGCCGCGGCGTGCGCGCGGTGACCGGCCAGACGCATGCATTGGTGGTCGAAGG CTTCCGCCTGTCCGATGCGATGGCGCGCCAGGGCACTGCCTTCCCGCCGCTGTACCGCGCGATGGTGGCGGCCGGCGAAA GCGCCGGGGCCTTGCCGCAGGTGCTCGAGCGCCTGGCCGACCTGCTCGAGCGCCAGGCGCAGGTGCGCAGCAAGCTGCAA TCCGCACTGGTGTACCCGGCAGCGTTGGCAATGACCGCCGGAGTGGTGGTCATCGTGCTGATGACCTTTGTGGTGCCCAA GGTGGTGGACCAGTTCGATTCGATGGGCCGCGCACTGCCGTGGCTCACCCGCGCGGTCATCGCGCTCTCGCAGTTTCTGC TGCATGCCGGCATTCCACTGCTGGTGGCTGGCGTGATCGCTGCGGTGGTGGCCGTGCAGGTGCGCAAGCGCCCGCCGGTG CGGCTGGCGATCGACCGGGCAATCCTGCGCGCGCCGCTGCTGGGGCGCTTGCTGCGCGACCTGCATGCCGCACGCATGGC GCGCACCCTGGCGATCATGGTCAACAGCGGCCTGCCGTTGATGGAAGGGCTGATGATCGCCGCGCGCACCGTGGACAACC ATGCGCTGCGCCTGGCCACCGACAGCATGGTCACCGCCATCCGCGAAGGCGGCAGCCTGGGCGCGGCGATGAAGCGCGCG GGCGTGTTTCCACCCACCTTGTTGTACATGGCCTCCAGCGGCGAAAACAGCGGGCGCCTGGCGCCGATGCTGGAACGTGC CGCCGACTATCTGGAGCGCGAATTCGAGTCGTTCACCACTGCGGCGATGAGCCTGCTGGAGCCGCTGATCATCGTGCTGC TGGGCGGCGTAGTGGCAGTGATCGTGTTGTCCATCCTGTTGCCCATTTTGCAATTCAACACCTTGGCACTCGGCTGA Protein sequence : MAKFDYTVLDLHGRNRHGVISADSVRSARSLLEQRQWVPLRVEPAAATTPMRAARFSGKDLVLFTRQLATLVDTAPLEEA LRTIGTQSERRGVRAVTGQTHALVVEGFRLSDAMARQGTAFPPLYRAMVAAGESAGALPQVLERLADLLERQAQVRSKLQ SALVYPAALAMTAGVVVIVLMTFVVPKVVDQFDSMGRALPWLTRAVIALSQFLLHAGIPLLVAGVIAAVVAVQVRKRPPV RLAIDRAILRAPLLGRLLRDLHAARMARTLAIMVNSGLPLMEGLMIAARTVDNHALRLATDSMVTAIREGGSLGAAMKRA GVFPPTLLYMASSGENSGRLAPMLERAADYLEREFESFTTAAMSLLEPLIIVLLGGVVAVIVLSILLPILQFNTLALG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 1e-51 | 42 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 6e-51 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| xcsF | NP_638769.1 | type II secretion system protein F | VFG2049 | Protein | 6e-50 | 41 |
| xcsF | NP_638769.1 | type II secretion system protein F | VFG0181 | Protein | 4e-47 | 41 |
